Mercurial > repos > patrick_chabrier > carboseq_s

diff carboseqSimulator.xml @ 4:b5a6c2d3e5e7 draft

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Uploaded
author siwaa
date Tue, 25 Jun 2024 15:44:17 +0000
parents 40f76111ab6c
children 4c1a7c22e770
line wrap: on
line diff
--- a/carboseqSimulator.xml	Tue Jun 25 14:58:11 2024 +0000
+++ b/carboseqSimulator.xml	Tue Jun 25 15:44:17 2024 +0000
@@ -10,6 +10,8 @@
   set -a ;source /usr/local/src/myscripts/.env &&
   mkdir tmp &&
   export TMP=\$(realpath -s tmp) &&
+  pwd &&
+  ls &&
   Rscript /usr/local/src/myscripts/scenarios/run-sim-perf/run.r --url=https://coby.infosol.inrae.fr:7777/semantify --srcDir=\$(realpath -s input) --srcOut=\$(realpath -s output) --NBCores=\${GALAXY_SLOTS:-4}&&
   mv output/* ${output}"
     ]]>