Mercurial > repos > patrick_chabrier > carboseq_s

changeset 7:fe6b69ede424 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author patrick_chabrier
date Mon, 01 Jul 2024 11:06:13 +0000
parents 29b8cd5389bf
children 74a8deeedd19
files carboseqSimulator.xml
diffstat 1 files changed, 4 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/carboseqSimulator.xml	Fri Jun 28 11:31:55 2024 +0000
+++ b/carboseqSimulator.xml	Mon Jul 01 11:06:13 2024 +0000
@@ -1,9 +1,11 @@
-<tool id="CarboSeqSimulator" name="CarboSeqSimulator" version="1.0.5">
+<tool id="CarboSeqSimulator" name="CarboSeqSimulator" version="1.0.6">
   <description>To run the CarboSeq simulator</description>
   <requirements>
-    <container type="singularity">docker://registry.forgemia.inra.fr/csopra/csopralibs:develop-98fae214</container>
+    <container type="singularity">docker://registry.forgemia.inra.fr/csopra/csopralibs:develop</container>
   </requirements>
   <command detect_errors="exit_code"><![CDATA[
+  (env | grep DOCKER_IMAGE) &&
+  printf " Image  Reg   : \$s\n" \$(env | grep DOCKER_IMAGE) &&
   bash -e -c "mkdir output &&
   unzip -d input ${input} &&
   mkdir tmp &&