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comparison tool_AZODYN.xml @ 9:ead8d0406cdb draft

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"planemo upload for repository https://forgemia.inra.fr/record/RECORD/-/tree/c9b430e4970fce7c1f410a1aa201e3434aa0ec05 commit c9b430e4970fce7c1f410a1aa201e3434aa0ec05-dirty"
author siwaa
date Wed, 10 Jan 2024 10:31:43 +0000
parents b72b6d36bf94
children 3afd67a53aa0
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8:b72b6d36bf94 9:ead8d0406cdb
1 <tool id="AZODYN" name="AZODYN crop models simulations" version="1.3.0"> 1 <tool id="AZODYN" name="AZODYN crop models simulations" version="1.4.0">
2 <description></description> 2 <description></description>
3 <requirements> 3 <requirements>
4 <container type="singularity">docker://registry.forgemia.inra.fr/record/record/azodyn_sunflo:image-azodynsunflo-1.3</container> 4 <container type="singularity">docker://registry.forgemia.inra.fr/record/record/azodyn_sunflo:image-azodynsunflo-1.4</container>
5 </requirements> 5 </requirements>
6 <command detect_errors="aggressive"> 6 <command detect_errors="aggressive">
7 unzip ${input_meteo}; 7 unzip ${input_meteo};
8 dos2unix -n ${file_input} internal_inputAZODYN.csv; 8 dos2unix -n ${file_input} internal_inputAZODYN.csv;
9 dos2unix -n ${file_outputs} internal_outputAZODYN.csv; 9 dos2unix -n ${file_outputs} internal_outputAZODYN.csv;
14 <inputs> 14 <inputs>
15 <param name="crop_type" type="select" label="Select crop to simulate"> 15 <param name="crop_type" type="select" label="Select crop to simulate">
16 <option value="AzodynPea.vpz">Pea</option> 16 <option value="AzodynPea.vpz">Pea</option>
17 <option value="AzodynWheat.vpz">Wheat</option> 17 <option value="AzodynWheat.vpz">Wheat</option>
18 <option value="AzodynBarley.vpz">Barley</option> 18 <option value="AzodynBarley.vpz">Barley</option>
19 <option value="AzodynColza.vpz">Rapeseed</option>
19 </param> 20 </param>
20 <param name="input_meteo" type="data" format="zip" label="Wheater serie input files (zip file)"/> 21 <param name="input_meteo" type="data" format="zip" label="Wheater serie input files (zip file)"/>
21 <param name="file_input" type="data" format="csv" label="Crop model input values"/> 22 <param name="file_input" type="data" format="csv" label="Crop model input values"/>
22 <param name="file_outputs" type="data" format="csv" label="Outputs to simulate"/> 23 <param name="file_outputs" type="data" format="csv" label="Outputs to simulate"/>
23 </inputs> 24 </inputs>