Mercurial > repos > siwaa > azodyn

diff tool_AZODYN.xml @ 4:5deede146fb6 draft

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"planemo upload for repository https://forgemia.inra.fr/record/RECORD/-/tree/master/misc/galaxy_tools commit 20d254fb2cc23d54b65e95f59033d625bf053c83"
author siwaa
date Tue, 03 May 2022 10:17:50 +0000
parents d1070fee9dc4
children 49c988e63e6b
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line diff
--- a/tool_AZODYN.xml	Wed Apr 27 09:59:49 2022 +0000
+++ b/tool_AZODYN.xml	Tue May 03 10:17:50 2022 +0000
@@ -5,9 +5,8 @@
   </requirements>
   <command detect_errors="aggressive">
     unzip ${input_meteo}; 
-    dos2unix -n ${file_input} internal_inputAZODYN.csv
-    dos2unix -n ${file_outputs} internal_outputAZODYN.csv
- 
+    dos2unix -n ${file_input} internal_inputAZODYN.csv;
+    dos2unix -n ${file_outputs} internal_outputAZODYN.csv; 
     /bin/bash -c "Rscript --verbose /data/rAzodynSunflo.R ${crop_type} AZODYN internal_inputAZODYN.csv internal_outputAZODYN.csv \${GALAXY_SLOTS:-2}";
     zip temp_results.zip  simresults_*.txt;
     cp temp_results.zip ${simresults};