Mercurial > repos > siwaa > carboseq

comparison getdata.xml @ 0:dbf5f81e2ed6 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://forgemia.inra.fr/carboseq/record-projet-carboseq commit c96c7945990db33f6c24b87e529c767f4a5ce25a"
author siwaa
date Wed, 06 Apr 2022 09:51:51 +0000
parents
children 305f3408f763
comparison
equal deleted inserted replaced
-1:000000000000 0:dbf5f81e2ed6
1 <tool id="CarboSeqGetData" name="CarboSeqGetData" version="1.0.0">
2 <description>To retrieve the data from the soil db</description>
3 <requirements>
4 <container type="singularity">docker://registry.forgemia.inra.fr/carboseq/record-projet-carboseq/getdatacsopraaial</container>
5 </requirements>
6 <command detect_errors="exit_code"><![CDATA[
7 bash -e -c "R -e \"source('/work/csopralibs/scripts/R/getDataCsopraAIAL.r', echo=TRUE)\" 2>&1; cp ./*.RData ${simulation_data}"
8 ]]>
9 </command>
10 <outputs>
11 <data format='rdata' name="simulation_data" label="CarboSeq simulations data"/>
12 </outputs>
13 <tests>
14 <test>
15 <output name="simulation_data">
16 <assert_contents>
17 <has_size value="216929" delta="100" />
18 </assert_contents>
19 </output>
20 </test>
21 </tests>
22 <help>
23 the CarboSeqGetData tool
24 ========================
25
26 credits
27 -------
28
29 - Wrapper Maintainer: Patrick Chabrier patrick.chabrier@inrae.fr
30 - Tool Maintainer: Eric Casellas eric.casellas@inrae.fr
31 - Tool Site: https://forgemia.inra.fr/carboseq/record-projet-carboseq
32 - Copyright: INRAE
33 </help>
34 </tool>