<tool id="erecord_text" name="erecord_text" version="1.0.0">

  <description>erecord returning .json</description>

  <requirements>

    <!-- singularity -->
    <container type="singularity">oras://registry.forgemia.inra.fr/nathalie.rousse/erecord-deploy/rep_recordb:9d6ea1defd50dd63fe036a7545a9ea527572192e</container>

    <!-- image locale -->
    <!-- container type="singularity">/home/nrousse/workspace_git/SIWAA_regroup/erecord-deploy/containers/_fab_SIMG/rep_recordb.simg</container-->

  </requirements>

  <command detect_errors="aggressive">
    <![CDATA[
    . /PYVENV/bin/activate;
    /bin/bash -c "python3 $__tool_directory__/main_text.py -data '${input_text}' -datafolder ${datafolder}";
    cp WS/OUT/output.json ${output_json};
    ]]>
  </command>

  <inputs>

    <param name="input_text" optional="true" type="text" area="true"
           label="Input json as text"/>

    <param name="datafolder" optional="true" type="data" format="zip"
           label="Add a datafolder zip file (available and used only in 'post_vpz_output' or 'post_vpz_inout' cases)"
           help="Precisions sur forme du dossier..."/>

  </inputs>

  <outputs>
    <data format="json" name="output_json" label="jsonoutput"/>
  </outputs>

  <tests>
  </tests>

  <help><![CDATA[

erecord_text.xml

================

Actions:

-------

- Available :

  - 'get_vpz_input' 'post_vpz_input'
  - 'get_vpz_output' 'post_vpz_output'
  - 'get_vpz_inout' 'post_vpz_inout'
  - 'get_pkg_list' 'get_pkg_vpz_list' 'get_pkg_data_list'
  - 'help'

- Unavailable (actions with 2 output files) :

  - 'get_vpz_experiment' 'post_vpz_experiment'
  - 'get_vpz_report_conditions' 'post_vpz_report_conditions'
  - 'get_vpz_report' 'post_vpz_report'

Code:

----

- main_text.py

Inputs:

-------

- data json as text (optional) (text, param type="text") 

  - This data contains the action value
  - Examples :

    - {"action":"pkg_list"}
    - {"action": "post_vpz_output", "pkgname": "wwdm", "vpzname": "wwdm.vpz", "style": "compactlist", "plan":"linear", "restype" : "matrix", "cond_wwdm.A": [0.0063, 0.0065, 0.0067], "cond_wwdm.B": 0.00201, "duration":6.0, "outselect": "view"}

- datafolder (optional) (only in 'post_vpz_output', 'post_vpz_inout' cases)

Outputs:

--------

- data json file (no other file returned)

Credits:

--------

-  Author: Nathalie Rousse nathalie.rousse@inrae.fr
-  Copyright: INRAE

  ]]>
  </help>

</tool>