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"planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
author siwaa
date Thu, 08 Jan 2026 12:57:10 +0000
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c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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1 <tool id="flatAr" name="flatAr" version="1.0.0">
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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2 <description>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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3 To build a simple archive of files only
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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4 </description>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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5 <command detect_errors="exit_code">
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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6 mkdir toArchive;
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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7 #for $input in $inputData
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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8 cp '$input' toArchive/'$input.name';
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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9 #end for
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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10 cd toArchive;
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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11 tar -cvzf ${output} *
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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12 </command>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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13 <inputs>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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14 <param name="inputData" type="data" format="netcdf" multiple="true" label="netcdf files hosting ariables"/>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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15 </inputs>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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16 <outputs>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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17 <data format="tgz" name="output" label="archive"/>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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18 </outputs>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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19 <tests>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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20 </tests>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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21 <help>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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22 Documentation
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
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23 -------------
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
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24 A tool to convert a collection of NetCdf files into a tgz archive
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
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25
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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26 Credits
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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27 -------
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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28 - Galaxy Tool Maintainer: Patrick Chabrier patrick.chabrier@inrae.fr
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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29 - Tool Site: https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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30 - Copyright: INRAE
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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31 </help>
c11ba04f1b8f "planemo upload for repository https://forge.inrae.fr/dairyfit/lot2/dairyfit-toolbox commit 7923fbe1a0cf1f15c3a39d3f73ba87618376d57b"
siwaa
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32 </tool>