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comparison src/MY_gama-headless.sh @ 13:13296d4a29cf draft

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planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/gama/GAMA/galaxy-tools commit 927c1d94ea613d36a1b4b8d048ba21ad43a6f55e-dirty
author siwaa
date Mon, 10 Jun 2024 09:58:18 +0000
parents 8623205348e5
children 5667e00be2aa
comparison
equal deleted inserted replaced
12:614bed83ba5d 13:13296d4a29cf
57 else 57 else
58 # create workspace in current folder 58 # create workspace in current folder
59 passWork=.workspace$(find ./ -maxdepth 1 -name ".workspace*" | wc -l) 59 passWork=.workspace$(find ./ -maxdepth 1 -name ".workspace*" | wc -l)
60 fi 60 fi
61 61
62
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64
65 #lun10juin
66 MY_JAVA_DIR=./_java
67 mkdir -p ./_java/.systemPrefs
68 mkdir -p ./_java/.userPrefs
69 #chmod -R 755 ./_java
70 chmod -R 777 ./_java
71 export JAVA_OPTS="-Djava.util.prefs.systemRoot=./_java -Djava.util.prefs.userRoot=./_java/.userPrefs"
72
73
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62 #if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then 76 #if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
63 MY_TEMP_DIR=. 77 MY_TEMP_DIR=.
64 if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.io.tmpdir=$MY_TEMP_DIR -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then 78 if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.io.tmpdir=$MY_TEMP_DIR -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
65 echo "Error in you command, here's the log :" 79 echo "Error in you command, here's the log :"
66 cat $passWork/.metadata/.log 80 cat $passWork/.metadata/.log