Mercurial > repos > siwaa > gama

comparison ESSAISENCOURS.txt @ 16:4117e2f0a591 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/gama/GAMA/galaxy-tools commit 927c1d94ea613d36a1b4b8d048ba21ad43a6f55e-dirty
author siwaa
date Mon, 10 Jun 2024 12:02:59 +0000
parents 5667e00be2aa
children 5a94c8c7c8cc
comparison
equal deleted inserted replaced
15:5667e00be2aa 16:4117e2f0a591
20 #------------------------------------------------------------------------------ 20 #------------------------------------------------------------------------------
21 21
22 gama.def: 22 gama.def:
23 + chmod -R 777 /opt 23 + chmod -R 777 /opt
24 24
25 <tool id="gama_tool" name="gama" version="1.0.0n"> 25 <tool id="gama_tool" name="gama" version="1.0.0o">
26 26
27 registry.forgemia.inra.fr/nathalie.rousse/use/gama:3fd4fb4b90db353af9bac01b99ee3b63220274c3 27 registry.forgemia.inra.fr/nathalie.rousse/use/gama:3fd4fb4b90db353af9bac01b99ee3b63220274c3
28 28
29 /bin/bash cmd_gama_headless.sh > run_server.txt & date > TTT.txt && sleep 600 && echo "fin sleep" >> TTT.txt && date >> TTT.txt && /bin/bash cmd_python_client.sh $nb_preys_init $nb_predators_init $nb_more_steps > run_client.txt; 29 /bin/bash cmd_gama_headless.sh > run_server.txt & date > TTT.txt && sleep 400 && echo "fin sleep" >> TTT.txt && date >> TTT.txt && /bin/bash cmd_python_client.sh $nb_preys_init $nb_predators_init $nb_more_steps > run_client.txt;
30 30
31 Singularity> echo $JAVA_HOME 31 Singularity> echo $JAVA_HOME
32 /opt/openjdk-17 32 /opt/openjdk-17
33 Singularity> which java 33 Singularity> which java
34 /opt/openjdk-17/bin/java 34 /opt/openjdk-17/bin/java
36 openjdk version "17-ea" 2021-09-14 36 openjdk version "17-ea" 2021-09-14
37 OpenJDK Runtime Environment (build 17-ea+14) 37 OpenJDK Runtime Environment (build 17-ea+14)
38 OpenJDK 64-Bit Server VM (build 17-ea+14, mixed mode, sharing) 38 OpenJDK 64-Bit Server VM (build 17-ea+14, mixed mode, sharing)
39 39
40 vim MY_gama-headless.sh : 40 vim MY_gama-headless.sh :
41 #lun10juin
42 MY_JAVA_DIR=./_java 41 MY_JAVA_DIR=./_java
43 mkdir -p ./_java/.systemPrefs 42 ...
44 mkdir -p ./_java/.userPrefs 43 echo "TRACE MY_gama-headless.sh: pwd:"
45 #chmod -R 755 ./_java 44 pwd;
46 chmod -R 777 ./_java 45 pwd > RRR.txt
47 #export JAVA_OPTS="-Djava.util.prefs.systemRoot=./_java -Djava.util.prefs.userRoot=./_java/.userPrefs"
48 if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.io.tmpdir=$MY_TEMP_DIR -Djava.util.prefs.systemRoot=./_java -Djava.util.prefs.userRoot=./_java/.userPrefs -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
49 46
47 if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.io.tmpdir=$MY_TEMP_DIR -Djava.util.prefs.systemRoot=${MY_JAVA_DIR} -Djava.util.prefs.userRoot=${MY_JAVA_USER_PREFS_DIR} -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
50 48
51
52 SOURCES
53 mkdir -p ~/.java/.systemPrefs
54 mkdir ~/.java/.userPrefs
55 chmod -R 755 ~/.java
56 export JAVA_OPTS="-Djava.util.prefs.systemRoot=/home/user/.java -Djava.util.prefs.userRoot=/home/user/.java/.userPrefs"
57 SOURCE AUTRE
58 ./jmeter -Djava.util.prefs.systemRoot=/home/youruser/.jmeter -Djava.util.prefs.userRoot=/home/youruser/.jmeter/.userPrefs
59