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comparison src/MY_gama-headless.sh @ 16:4117e2f0a591 draft

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planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/gama/GAMA/galaxy-tools commit 927c1d94ea613d36a1b4b8d048ba21ad43a6f55e-dirty
author siwaa
date Mon, 10 Jun 2024 12:02:59 +0000
parents 5667e00be2aa
children 1437cd0df25b
comparison
equal deleted inserted replaced
15:5667e00be2aa 16:4117e2f0a591
57 else 57 else
58 # create workspace in current folder 58 # create workspace in current folder
59 passWork=.workspace$(find ./ -maxdepth 1 -name ".workspace*" | wc -l) 59 passWork=.workspace$(find ./ -maxdepth 1 -name ".workspace*" | wc -l)
60 fi 60 fi
61 61
62 #if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
63
64 MY_JAVA_DIR=./_java
65 MY_JAVA_SYSTEM_PREFS_DIR=${MY_JAVA_DIR}/.systemPrefs
66 MY_JAVA_USER_PREFS_DIR=${MY_JAVA_DIR}/.userPrefs
67 mkdir -p ${MY_JAVA_DIR}
68 mkdir -p ${MY_JAVA_SYSTEM_PREFS_DIR}
69 mkdir -p ${MY_JAVA_USER_PREFS_DIR}
70 chmod -R 777 ${MY_JAVA_DIR}
71
72 MY_TEMP_DIR=.
62 73
63 74
64 75 echo "TRACE MY_gama-headless.sh: pwd:"
65 #lun10juin 76 pwd;
66 MY_JAVA_DIR=./_java 77 pwd > RRR.txt
67 mkdir -p ./_java/.systemPrefs
68 mkdir -p ./_java/.userPrefs
69 #chmod -R 755 ./_java
70 chmod -R 777 ./_java
71 #export JAVA_OPTS="-Djava.util.prefs.systemRoot=./_java -Djava.util.prefs.userRoot=./_java/.userPrefs"
72 78
73 79
74 80 if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.io.tmpdir=$MY_TEMP_DIR -Djava.util.prefs.systemRoot=${MY_JAVA_DIR} -Djava.util.prefs.userRoot=${MY_JAVA_USER_PREFS_DIR} -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
75
76 #if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
77 MY_TEMP_DIR=.
78 if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.io.tmpdir=$MY_TEMP_DIR -Djava.util.prefs.systemRoot=./_java -Djava.util.prefs.userRoot=./_java/.userPrefs -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
79 echo "Error in you command, here's the log :" 81 echo "Error in you command, here's the log :"
80 cat $passWork/.metadata/.log 82 cat $passWork/.metadata/.log
81 exit 1 83 exit 1
82 fi 84 fi
83 85