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comparison ESSAISENCOURS.txt @ 15:5667e00be2aa draft

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planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/gama/GAMA/galaxy-tools commit 927c1d94ea613d36a1b4b8d048ba21ad43a6f55e-dirty
author siwaa
date Mon, 10 Jun 2024 10:38:08 +0000
parents e7772bdae78d
children 4117e2f0a591
comparison
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14:e7772bdae78d 15:5667e00be2aa
20 #------------------------------------------------------------------------------ 20 #------------------------------------------------------------------------------
21 21
22 gama.def: 22 gama.def:
23 + chmod -R 777 /opt 23 + chmod -R 777 /opt
24 24
25 <tool id="gama_tool" name="gama" version="1.0.0m"> 25 <tool id="gama_tool" name="gama" version="1.0.0n">
26 26
27 registry.forgemia.inra.fr/nathalie.rousse/use/gama:3fd4fb4b90db353af9bac01b99ee3b63220274c3 27 registry.forgemia.inra.fr/nathalie.rousse/use/gama:3fd4fb4b90db353af9bac01b99ee3b63220274c3
28 28
29 /bin/bash cmd_gama_headless.sh > run_server.txt & date > TTT.txt && sleep 600 && echo "fin sleep" >> TTT.txt && date >> TTT.txt && /bin/bash cmd_python_client.sh $nb_preys_init $nb_predators_init $nb_more_steps > run_client.txt; 29 /bin/bash cmd_gama_headless.sh > run_server.txt & date > TTT.txt && sleep 600 && echo "fin sleep" >> TTT.txt && date >> TTT.txt && /bin/bash cmd_python_client.sh $nb_preys_init $nb_predators_init $nb_more_steps > run_client.txt;
30 30
42 MY_JAVA_DIR=./_java 42 MY_JAVA_DIR=./_java
43 mkdir -p ./_java/.systemPrefs 43 mkdir -p ./_java/.systemPrefs
44 mkdir -p ./_java/.userPrefs 44 mkdir -p ./_java/.userPrefs
45 #chmod -R 755 ./_java 45 #chmod -R 755 ./_java
46 chmod -R 777 ./_java 46 chmod -R 777 ./_java
47 export JAVA_OPTS="-Djava.util.prefs.systemRoot=./_java -Djava.util.prefs.userRoot=./_java/.userPrefs" 47 #export JAVA_OPTS="-Djava.util.prefs.systemRoot=./_java -Djava.util.prefs.userRoot=./_java/.userPrefs"
48 if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.io.tmpdir=$MY_TEMP_DIR -Djava.util.prefs.systemRoot=./_java -Djava.util.prefs.userRoot=./_java/.userPrefs -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
49
48 50
49 51
50 SOURCES 52 SOURCES
51 mkdir -p ~/.java/.systemPrefs 53 mkdir -p ~/.java/.systemPrefs
52 mkdir ~/.java/.userPrefs 54 mkdir ~/.java/.userPrefs