# HG changeset patch
# User siwaa
# Date 1717779697 0
# Node ID 39b499a105c97e9e06645396e40daab6cc150424
# Parent  6a1c0aabe956e1a7468f78bca8a683a6f28b14b5
planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/gama/GAMA/galaxy-tools commit 67d85c013c62c16392b4796af86836b1334f2eef-dirty

diff -r 6a1c0aabe956 -r 39b499a105c9 ESSAISENCOURS.txt
--- a/ESSAISENCOURS.txt	Fri Jun 07 16:06:21 2024 +0000
+++ b/ESSAISENCOURS.txt	Fri Jun 07 17:01:37 2024 +0000
@@ -7,10 +7,6 @@
 
 => tourne infini
 
-Note : consigne DOC image docker gama-server :
-docker run -v <path/to/your/workspace>:/working_dir -p 6868:6868 gamaplatform/gama:<version> -socket 6868
-NOUS, pas : -p 6868:6868 -socket 6868 !!!
-
 #------------------------------------------------------------------------------
 # Essai
 <tool id="gama_tool" name="gama" version="1.0.0g">
@@ -21,4 +17,12 @@
 
     ]]>
 #------------------------------------------------------------------------------
+# + Essai
 
+
+
+
+
+
+#------------------------------------------------------------------------------
+
diff -r 6a1c0aabe956 -r 39b499a105c9 gama_tool.xml
--- a/gama_tool.xml	Fri Jun 07 16:06:21 2024 +0000
+++ b/gama_tool.xml	Fri Jun 07 17:01:37 2024 +0000
@@ -1,4 +1,4 @@
-<tool id="gama_tool" name="gama" version="1.0.0g">
+<tool id="gama_tool" name="gama" version="1.0.0h">
 
   <description>tool for GAMA Platform</description>
 
@@ -13,6 +13,7 @@
 
   <command detect_errors="aggressive">
     <![CDATA[
+    mkdir ./javatmpdir; chmod 777 ./javatmpdir;
     cp -fr /opt/gama-platform .;
     cp $__tool_directory__/src/MY_predatorPrey.gaml gama-platform/headless/samples/predatorPrey/.;
     cp $__tool_directory__/src/MY_gama-headless.sh gama-platform/headless/.;
diff -r 6a1c0aabe956 -r 39b499a105c9 job_conf.xml
--- a/job_conf.xml	Fri Jun 07 16:06:21 2024 +0000
+++ b/job_conf.xml	Fri Jun 07 17:01:37 2024 +0000
@@ -19,9 +19,3 @@
 
 </job_conf>
 
-
-
-
-<-- docker run -v <path/to/your/workspace>:/working_dir -p 6868:6868 gamaplatform/gama:<version> -socket 6868
-
- -->
diff -r 6a1c0aabe956 -r 39b499a105c9 src/.MY_gama-headless.sh.swp
Binary file src/.MY_gama-headless.sh.swp has changed
diff -r 6a1c0aabe956 -r 39b499a105c9 src/MY_gama-headless.sh
--- a/src/MY_gama-headless.sh	Fri Jun 07 16:06:21 2024 +0000
+++ b/src/MY_gama-headless.sh	Fri Jun 07 17:01:37 2024 +0000
@@ -60,7 +60,8 @@
 fi
 
 #if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
-MY_TEMP_DIR=.
+#MY_TEMP_DIR=.
+MY_TEMP_DIR=javatmpdir
 if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.io.tmpdir=$MY_TEMP_DIR -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
     echo "Error in you command, here's the log :"
     cat $passWork/.metadata/.log