Mercurial > repos > siwaa > gama

changeset 11:8623205348e5 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/gama/GAMA/galaxy-tools commit 67d85c013c62c16392b4796af86836b1334f2eef-dirty
author siwaa
date Fri, 07 Jun 2024 17:37:53 +0000
parents e9f88963b517
children 614bed83ba5d
files ESSAISENCOURS.txt gama_tool.xml src/MY_gama-headless.sh
diffstat 3 files changed, 6 insertions(+), 15 deletions(-) [+]
line wrap: on
line diff
--- a/ESSAISENCOURS.txt	Fri Jun 07 17:13:54 2024 +0000
+++ b/ESSAISENCOURS.txt	Fri Jun 07 17:37:53 2024 +0000
@@ -9,19 +9,12 @@
 
 #------------------------------------------------------------------------------
 # Essai
-<tool id="gama_tool" name="gama" version="1.0.0g">
-
-    <![CDATA[
-
-    /bin/bash cmd_gama_headless.sh > run_server.txt & date > TTT.txt && sleep 300 && echo "fin sleep" >> TTT.txt && date >> TTT.txt && /bin/bash cmd_python_client.sh $nb_preys_init $nb_predators_init $nb_more_steps > run_client.txt;
+<tool id="gama_tool" name="gama" version="1.0.0j">
 
-    ]]>
-#------------------------------------------------------------------------------
-# + Essai
-<tool id="gama_tool" name="gama" version="1.0.0i">
+-    /bin/bash cmd_gama_headless.sh > run_server.txt & sleep 20 && /bin/bash cmd_python_client.sh $nb_preys_init $nb_predators_init $nb_more_steps > run_client.txt;
++    /bin/bash cmd_gama_headless.sh > run_server.txt & date > TTT.txt && sleep 300 && echo "fin sleep" >> TTT.txt && date >> TTT.txt && /bin/bash cmd_python_client.sh $nb_preys_init $nb_predators_init $nb_more_steps > run_client.txt;
 
-mkdir javatmpdir; chmod 777 javatmpdir;
-MY_TEMP_DIR=javatmpdir
+
 
 #------------------------------------------------------------------------------
 
--- a/gama_tool.xml	Fri Jun 07 17:13:54 2024 +0000
+++ b/gama_tool.xml	Fri Jun 07 17:37:53 2024 +0000
@@ -1,4 +1,4 @@
-<tool id="gama_tool" name="gama" version="1.0.0i">
+<tool id="gama_tool" name="gama" version="1.0.0j">
 
   <description>tool for GAMA Platform</description>
 
--- a/src/MY_gama-headless.sh	Fri Jun 07 17:13:54 2024 +0000
+++ b/src/MY_gama-headless.sh	Fri Jun 07 17:37:53 2024 +0000
@@ -60,9 +60,7 @@
 fi
 
 #if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
-#MY_TEMP_DIR=.
-mkdir javatmpdir; chmod 777 javatmpdir;
-MY_TEMP_DIR=javatmpdir
+MY_TEMP_DIR=.
 if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.io.tmpdir=$MY_TEMP_DIR -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then
     echo "Error in you command, here's the log :"
     cat $passWork/.metadata/.log