Mercurial > repos > siwaa > gama
changeset 10:e9f88963b517 draft
planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/gama/GAMA/galaxy-tools commit 67d85c013c62c16392b4796af86836b1334f2eef-dirty
| author | siwaa |
|---|---|
| date | Fri, 07 Jun 2024 17:13:54 +0000 |
| parents | 39b499a105c9 |
| children | 8623205348e5 |
| files | ESSAISENCOURS.txt gama_tool.xml src/.MY_gama-headless.sh.swp src/MY_gama-headless.sh |
| diffstat | 4 files changed, 5 insertions(+), 6 deletions(-) [+] |
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--- a/ESSAISENCOURS.txt Fri Jun 07 17:01:37 2024 +0000 +++ b/ESSAISENCOURS.txt Fri Jun 07 17:13:54 2024 +0000 @@ -18,11 +18,10 @@ ]]> #------------------------------------------------------------------------------ # + Essai - - +<tool id="gama_tool" name="gama" version="1.0.0i"> - - +mkdir javatmpdir; chmod 777 javatmpdir; +MY_TEMP_DIR=javatmpdir #------------------------------------------------------------------------------
--- a/gama_tool.xml Fri Jun 07 17:01:37 2024 +0000 +++ b/gama_tool.xml Fri Jun 07 17:13:54 2024 +0000 @@ -1,4 +1,4 @@ -<tool id="gama_tool" name="gama" version="1.0.0h"> +<tool id="gama_tool" name="gama" version="1.0.0i"> <description>tool for GAMA Platform</description> @@ -13,7 +13,6 @@ <command detect_errors="aggressive"> <![CDATA[ - mkdir ./javatmpdir; chmod 777 ./javatmpdir; cp -fr /opt/gama-platform .; cp $__tool_directory__/src/MY_predatorPrey.gaml gama-platform/headless/samples/predatorPrey/.; cp $__tool_directory__/src/MY_gama-headless.sh gama-platform/headless/.;
--- a/src/MY_gama-headless.sh Fri Jun 07 17:01:37 2024 +0000 +++ b/src/MY_gama-headless.sh Fri Jun 07 17:13:54 2024 +0000 @@ -61,6 +61,7 @@ #if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then #MY_TEMP_DIR=. +mkdir javatmpdir; chmod 777 javatmpdir; MY_TEMP_DIR=javatmpdir if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.io.tmpdir=$MY_TEMP_DIR -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then echo "Error in you command, here's the log :"