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planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/gama/GAMA_DESC/galaxy-tools commit 6b9b95de1fe709f27a28d83797f81e91469edf79-dirty
author siwaa
date Mon, 18 Nov 2024 13:57:51 +0000
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1 <tool id="gama_desc" name="gama_desc" version="1.0.0">
2
3 <description>tool producing a description JSON data of a GAML model file</description>
4
5 <requirements>
6
7 <!-- singularity -->
8 <container type="docker">python:3.10-slim</container>
9
10 </requirements>
11
12 <command detect_errors="aggressive">
13 <![CDATA[
14 cp $__tool_directory__/desc.py .;
15 cp ${model_gaml} model.gaml;
16 python3 desc.py;
17 cp desc.json ${desc_json};
18 ]]>
19 </command>
20
21 <inputs>
22
23 <param name="model_gaml" optional="false" type="data" format="txt"
24 label="GAML model (.gaml format)"/>
25
26 </inputs>
27
28 <outputs>
29 <data format="json" name="desc_json" label="JSON description of GAML model"/>
30 </outputs>
31
32 <tests>
33 </tests>
34
35 <help><![CDATA[
36
37 Desc:
38
39 -----
40
41 gama_desc.xml tool produces a description JSON data of a GAML model file.
42
43 Inputs:
44
45 - model_gaml
46
47 Outputs:
48
49 - desc_json
50
51 Credits:
52
53 --------
54
55 - Author: Nathalie Rousse nathalie.rousse@inrae.fr
56 - Copyright: INRAE
57
58 ]]>
59 </help>
60
61 </tool>
62