view gama_desc.xml @ 0:23b15c0eabff draft default tip

planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/gama/GAMA_DESC/galaxy-tools commit 6b9b95de1fe709f27a28d83797f81e91469edf79-dirty
author siwaa
date Mon, 18 Nov 2024 13:57:51 +0000
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<tool id="gama_desc" name="gama_desc" version="1.0.0">

  <description>tool producing a description JSON data of a GAML model file</description>

  <requirements>

    <!-- singularity --> 
    <container type="docker">python:3.10-slim</container>

  </requirements>

  <command detect_errors="aggressive">
    <![CDATA[
    cp $__tool_directory__/desc.py .;
    cp ${model_gaml} model.gaml;
    python3 desc.py;
    cp desc.json ${desc_json};
    ]]>
  </command>

  <inputs>

    <param name="model_gaml" optional="false" type="data" format="txt"
           label="GAML model (.gaml format)"/>

  </inputs>

  <outputs>
    <data format="json" name="desc_json" label="JSON description of GAML model"/>
  </outputs>

  <tests>
  </tests>

  <help><![CDATA[

Desc:

-----

gama_desc.xml tool produces a description JSON data of a GAML model file.

Inputs:

  - model_gaml

Outputs:

  - desc_json

Credits:

--------

-  Author: Nathalie Rousse nathalie.rousse@inrae.fr
-  Copyright: INRAE

  ]]>
  </help>

</tool>