Mercurial > repos > siwaa > gama_legacy_gen
diff src/MY_gama-headless.sh @ 0:fb186a4fb3e0 draft
planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/gama/GAMA_HEADLESS_LEGACY/galaxy-tools/gama_legacy_gen commit 14769577c04bcb2781b2d240f1f57a2342169cce-dirty
author | siwaa |
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date | Fri, 02 Aug 2024 18:02:56 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/src/MY_gama-headless.sh Fri Aug 02 18:02:56 2024 +0000 @@ -0,0 +1,79 @@ +#!/bin/bash + +javaVersion=$(java -version 2>&1 | head -n 1 | cut -d "\"" -f 2) +# Check if good Java version before everything +if [[ ${javaVersion:2} == 17 ]]; then + echo "You should use Java 17 to run GAMA" + echo "Found you using version : $javaVersion" + exit 1 +fi + +memory="0" + +for arg do + shift + case $arg in + -m) + memory="${1}" + shift + ;; + *) + set -- "$@" "$arg" + ;; + esac +done + +if [[ $memory == "0" ]]; then + memory=$(grep Xmx "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../Gama.ini || echo "-Xmx4096m") +else + memory=-Xmx$memory +fi + +workspaceCreate=0 +case "$@" in + *-help*|*-version*|*-validate*|*-test*|*-xml*|*-batch*|*-write-xmi*|*-socket*) + workspaceCreate=1 + ;; +esac + + +echo "******************************************************************" +echo "* GAMA version 1.9.1 *" +echo "* http://gama-platform.org *" +echo "* (c) 2007-2023 UMI 209 UMMISCO IRD/SU & Partners *" +echo "******************************************************************" +passWork=.workspace +# w/ output folder +if [ $workspaceCreate -eq 0 ]; then + # create output folder if not existing + if [ ! -d "${@: -1}" ]; then + mkdir ${@: -1} + fi + # create workspace in output folder + passWork=${@: -1}/.workspace$(find ${@: -1} -name ".workspace*" | wc -l) + mkdir -p $passWork + +# w/o output folder +else + # create workspace in current folder + passWork=.workspace$(find ./ -maxdepth 1 -name ".workspace*" | wc -l) +fi + +#if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then + +MY_JAVA_DIR=./_java +MY_JAVA_SYSTEM_PREFS_DIR=${MY_JAVA_DIR}/.systemPrefs +MY_JAVA_USER_PREFS_DIR=${MY_JAVA_DIR}/.userPrefs +mkdir -p ${MY_JAVA_DIR} +mkdir -p ${MY_JAVA_SYSTEM_PREFS_DIR} +mkdir -p ${MY_JAVA_USER_PREFS_DIR} +chmod -R 777 ${MY_JAVA_DIR} + +MY_TEMP_DIR=. + +if ! java -cp "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/../plugins/org.eclipse.equinox.launcher*.jar -Xms512m $memory -Djava.io.tmpdir=$MY_TEMP_DIR -Djava.util.prefs.systemRoot=${MY_JAVA_DIR} -Djava.util.prefs.userRoot=${MY_JAVA_USER_PREFS_DIR} -Djava.awt.headless=true org.eclipse.core.launcher.Main -configuration "$( dirname $( realpath "${BASH_SOURCE[0]}" ) )"/configuration -application msi.gama.headless.product -data $passWork "$@"; then + echo "Error in you command, here's the log :" + cat $passWork/.metadata/.log + exit 1 +fi +