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comparison redelacPlanExpander.xml @ 3:ecbd096ba43b draft default tip

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"planemo upload for repository https://forgemia.inra.fr/redelac/redelac-toolbox/-/tree/b4ec8ff39b5d159c4f9def1a6a450b1fbcd698a2/tools/REDELACplanExpander commit b4ec8ff39b5d159c4f9def1a6a450b1fbcd698a2-dirty"
author siwaa
date Tue, 07 May 2024 11:45:15 +0000
parents 789a70a4c317
children
comparison
equal deleted inserted replaced
2:47dafd3de5ef 3:ecbd096ba43b
1 <tool id="redelacPlanExpander" name="redelacPlanExpander" version="1.0.0"> 1 <tool id="redelacPlanExpander" name="redelacPlanExpander" version="1.0.2">
2 <description>to expand REDELAC situations according to a plan</description> 2 <description>to expand REDELAC situations according to a plan</description>
3 <requirements> 3 <requirements>
4 <container type="singularity">docker://registry.forgemia.inra.fr/redelac/redelac-toolbox:latest</container> 4 <container type="singularity">docker://registry.forgemia.inra.fr/redelac/redelac-toolbox:latest</container>
5 </requirements> 5 </requirements>
6 <command detect_errors="aggressive"> 6 <command detect_errors="aggressive">
7 <![CDATA[ 7 <![CDATA[
8 python $__tool_directory__/redelacPlanExpander.py ${typeOfRotation} ${USMs} ${Liste_plantes} ${REDELACplan} ${mailles} ${USMsExp} ${SuccessionsExp} ${Stations} ${aclimParHorizon} ${latitudeMailleDrias} ${StationsExp} 8 python $__tool_directory__/redelacPlanExpander.py ${USMs} ${Liste_plantes} ${REDELACplan} ${mailles} ${USMsExp} ${SuccessionsExp} ${Stations} ${aclimParHorizon} ${latitudeMailleDrias} ${StationsExp}
9 ]]> 9 ]]>
10 </command> 10 </command>
11 <inputs> 11 <inputs>
12 <param name="typeOfRotation" type="select" label="Select the type of rotation">
13 <option value="PP">Prairie Permanente</option>
14 <option value="GC">Grande Culture</option>
15 </param>
16 <param name="REDELACplan" type="data" format="csv" label="Select a redelac spatial plan (csv)"/> 12 <param name="REDELACplan" type="data" format="csv" label="Select a redelac spatial plan (csv)"/>
17 <param name="USMs" type="data" format="csv" label="Select a USMs list template (csv)"/> 13 <param name="USMs" type="data" format="csv" label="Select a USMs list template (csv)"/>
18 <param name="Liste_plantes" type="data" format="csv" label="Select a Liste_plantes (csv)"/> 14 <param name="Liste_plantes" type="data" format="csv" label="Select a Liste_plantes (csv)"/>
19 <param name="Stations" type="data" format="csv" label="Select a Stations (csv)"/> 15 <param name="Stations" type="data" format="csv" label="Select a Stations (csv)"/>
20 <param name="mailles" type="data" format="csv" label="Select mailles files with link between DRIAS and Safran (csv)"/> 16 <param name="mailles" type="data" format="csv" label="Select mailles files with link between DRIAS and Safran (csv)"/>
21 <param name="aclimParHorizon" type="data" format="csv" label="Select a aclimParHorizon (csv)"/> 17 <param name="aclimParHorizon" type="data" format="csv" label="Select a aclimParHorizon (csv)"/>
22 <param name="latitudeMailleDrias" type="data" format="csv" label="Select a latitudeMailleDrias(csv)"/> 18 <param name="latitudeMailleDrias" type="data" format="csv" label="Select a latitudeMailleDrias(csv)"/>
23 <param name="Tag" type="text" value="" label="Outputs tag"/>
24 </inputs> 19 </inputs>
25 <outputs> 20 <outputs>
26 <data format="csv" name="USMsExp" label="USMsSheetExp${Tag}"/> 21 <data format="csv" name="USMsExp" label="USMsSheetExp"/>
27 <data format="csv" name="StationsExp" label="StationsSheetExp${Tag}"/> 22 <data format="csv" name="StationsExp" label="StationsSheetExp"/>
28 <data format="csv" name="SuccessionsExp" label="successionsSheetExp${Tag}"/> 23 <data format="csv" name="SuccessionsExp" label="successionsSheetExp"/>
29 </outputs> 24 </outputs>
30 <tests> 25 <tests>
31 </tests> 26 </tests>
32 <help> 27 <help>
33 Documentation 28 Documentation