view redelacSticsInputGenerator.xml @ 5:4f8d87b9c246 draft

"planemo upload for repository https://forgemia.inra.fr/redelac commit b3a95e69b8c2496ff3ec12c854404798d8bc55b1"
author siwaa
date Tue, 04 Jul 2023 16:37:44 +0000
parents af7d9ca55205
children fb6f7d60508d
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<tool id="redelacSticsInputGenerator" name="redelacSticsInputGenerator" version="1.0.1">
  <description>to run generate Stics Inputs for REDELAC</description>
  <requirements>
    <container type="singularity">docker://registry.forgemia.inra.fr/quaysofthestics/sticsquays/rstudio_stics_test:10.0.0</container>
  </requirements>
  <command detect_errors="aggressive">
    <![CDATA[
	     bash $__tool_directory__/redelacSticsInputGenerator.bash $__tool_directory__ ${Workspace} ${Climat} ${USMs} ${Tec} ${Ini} ${Station} ${GeneratedWorkspace}
     ]]>
  </command>
  <inputs>
    <param name="Workspace" type="data" format="zip" label="Select a stics Workspace (zip file)"/>
    <param name="Climat" type="data" format="zip" label="Select a climat scenario (zip file)"/>    
    <param name="USMs" type="data" format="csv" label="Select the USMs sheet (csv)"/>
    <param name="Tec" type="data" format="csv" label="Select the Tec sheet (csv)"/>
    <param name="Ini" type="data" format="csv" label="Select the Ini sheet (csv)"/>
    <param name="Station" type="data" format="csv" label="Select the Station sheet (csv)"/>
    <param name="Tag" type="text" value="" label="Outputs tag"/>
  </inputs>
  <outputs>
    <data format="zip" name="GeneratedWorkspace"
          label="GeneratedWorkspace${Tag}">
    </data>
  </outputs>
  <tests>
  </tests>
  <help>
*The usage of this tool is restricted to the user of the stics_authorized group.*

*To be granted, apply to the Project Stics Team and then request to SIWAA*

Documentation
-------------
A tool to generate Stics Inputs according to a plan for REDELAC

Credits
-------
-  Wrapped Tool Author: https://www6.paca.inrae.fr/stics_eng/About-us/Project-Stics-Team
-  Stics Site: https://www6.paca.inra.fr/stics_eng
-  Galaxy Tool Maintainer: Patrick Chabrier patrick.chabrier@inrae.fr
-  Copyright: INRAE
  </help>
</tool>