Mercurial > repos > siwaa > redelac_stics_t

comparison redelacSticsTool.bash @ 15:af807768332e draft default tip

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"planemo upload for repository https://forgemia.inra.fr/redelac commit 179e64aac208ae8af4d7416a7d5ff4b9da572850"
author siwaa
date Fri, 06 Feb 2026 13:28:00 +0000
parents cbd23f8906db
children
comparison
equal deleted inserted replaced
14:30d7b0210581 15:af807768332e
26 unzip -q -o ${11} && 26 unzip -q -o ${11} &&
27 cp -r plant WS && 27 cp -r plant WS &&
28 cp config/param_gen.xml WS && 28 cp config/param_gen.xml WS &&
29 cp config/param_newform.xml WS 29 cp config/param_newform.xml WS
30 fi) && 30 fi) &&
31 /usr/bin/time -p -o ./bashlog Rscript --verbose $4/redelacSticsTool.R $1 $2 $3 ${15} && 31 /usr/bin/time -p -o ./bashlog Rscript --verbose $4/redelacSticsTool.R $1 $2 $3 ${15} ${18} &&
32 echo "Step 1, time to run the R script:" && 32 echo "Step 1, time to run the R script:" &&
33 echo "=================================" && 33 echo "=================================" &&
34 cat ./bashlog && 34 cat ./bashlog &&
35 echo "=================================" && 35 echo "=================================" &&
36 cd WS && 36 cd WS &&