# HG changeset patch
# User siwaa
# Date 1729791922 0
# Node ID cbd23f8906db9a5d1125e9dfd64af2d86abdf3bc
# Parent  200c20fddc808ba9cd0cb3075726df90f25d7c86
"planemo upload for repository https://forgemia.inra.fr/redelac commit 53d19ea66881dcd272711c98940626fa6bb58075"

diff -r 200c20fddc80 -r cbd23f8906db redelacSticsTool.bash
--- a/redelacSticsTool.bash	Thu Oct 10 12:16:43 2024 +0000
+++ b/redelacSticsTool.bash	Thu Oct 24 17:45:22 2024 +0000
@@ -23,7 +23,10 @@
 cd JavaSTICS-1.5.1-STICS-10.0.0 &&
 (if [ "${11}" != "noAdditionalPlantOrConfig" ];
  then
-   unzip -q -o ${11}
+     unzip -q -o ${11} &&
+	 cp -r plant WS &&
+	 cp config/param_gen.xml WS &&
+	 cp config/param_newform.xml WS
 fi) &&
 /usr/bin/time -p -o ./bashlog Rscript --verbose $4/redelacSticsTool.R $1 $2 $3 ${15} &&
 echo "Step 1, time to run the R script:" &&
diff -r 200c20fddc80 -r cbd23f8906db redelacSticsTool.xml
--- a/redelacSticsTool.xml	Thu Oct 10 12:16:43 2024 +0000
+++ b/redelacSticsTool.xml	Thu Oct 24 17:45:22 2024 +0000
@@ -1,4 +1,4 @@
-<tool id="redelacSticsTool" name="redelacSticsTool" version="1.0.8">
+<tool id="redelacSticsTool" name="redelacSticsTool" version="1.0.9">
   <description>to run Stics for REDELAC</description>
   <requirements>
     <container type="singularity">docker://registry.forgemia.inra.fr/redelac/redelac-toolbox/sticsrpacks:968d2d44e4c167974753344d6c8efa53e1788527</container>