Mercurial > repos > siwaa > redelac_stics_t
changeset 27:30333c174cc0 draft default tip
"planemo upload for repository https://forgemia.inra.fr/redelac commit d2b05bc9e593c43f8c041ef8d08918b36d500c6e"
| author | siwaa |
|---|---|
| date | Tue, 01 Sep 2026 12:20:43 +0000 |
| parents | e4fa8e333e81 |
| children | |
| files | redelacSticsTool.xml |
| diffstat | 1 files changed, 8 insertions(+), 2 deletions(-) [+] |
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--- a/redelacSticsTool.xml Tue Sep 01 09:11:57 2026 +0000 +++ b/redelacSticsTool.xml Tue Sep 01 12:20:43 2026 +0000 @@ -1,4 +1,4 @@ -<tool id="redelacSticsTool" name="redelacSticsTool" version="1.0.28"> +<tool id="redelacSticsTool" name="redelacSticsTool" version="1.0.29"> <description>to run Stics for REDELAC</description> <requirements> <container type="singularity">docker://registry.forge.inrae.fr/redelac/redelac-toolbox/sticsrpacks:5337507635242b3ad0f3559a1a6b666512ecf002 @@ -22,7 +22,13 @@ #else parallel=sequential && #end if - bash $__tool_directory__/redelacSticsTool.bash ${REDELAC.optim} \${parallel} \${GALAXY_SLOTS:-4} $__tool_directory__ ${Workspace} ${Climat} ${USMs} ${Tec} ${Ini} ${Station} \${additional} ${GeneratedWorkspace} ${compress} ${outputsOnly} ${Scenario} ${SimulationResults} ${SuccessionPlan} ${outpuType} ${S3.S3} s3://${S3.Bucket}/${S3.objectPath} + #if $S3.S3 == 'ok': + s3=ok && pathtos3=s3://${S3.Bucket}/${S3.objectPath} && + #else + s3=ko && pathtos3="" && + #end if + echo \${s3} && echo \${pathtos3} && + bash $__tool_directory__/redelacSticsTool.bash ${REDELAC.optim} \${parallel} \${GALAXY_SLOTS:-4} $__tool_directory__ ${Workspace} ${Climat} ${USMs} ${Tec} ${Ini} ${Station} \${additional} ${GeneratedWorkspace} ${compress} ${outputsOnly} ${Scenario} ${SimulationResults} ${SuccessionPlan} ${outpuType} \${s3} \${pathtos3} ]]> </command> <inputs>