diff redelacxlsx2csv.xml @ 0:dd02fab383bf draft

"planemo upload for repository https://forgemia.inra.fr/redelac commit 841d6c6ada2dad3dd575d25aab620491fda5c611"
author siwaa
date Mon, 19 Jun 2023 15:32:54 +0000
parents
children b91beff0963c
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/redelacxlsx2csv.xml	Mon Jun 19 15:32:54 2023 +0000
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+<tool id="redelacXlsx2Csv" name="redelacXlsx2Csv" version="1.0.0">
+  <description>to split a xlsx spatial unit configuration file into csv sheet 4 REDELAC</description>
+  <requirements>
+    <container type="singularity">docker://registry.forgemia.inra.fr/redelac/redelac-toolbox:latest</container>
+  </requirements>
+  <command detect_errors="aggressive">
+    <![CDATA[
+	     python  $__tool_directory__/redelacxlsx2csv.py ${REDELACrot} ${USMs} ${Tec} ${Ini} ${Station} ${Liste_plantes}
+     ]]>
+  </command>
+  <inputs>
+    <param name="REDELACrot" type="data" format="xlsx" label="Select a REDELAC single spatial unit rotation input configuration (xlsx)"/>
+  </inputs>
+  <outputs>
+    <data name="USMs" format="csv" label="USMs Sheet (csv)"/>
+    <data name="Station" format="csv" label="Stations Sheet (csv)"/>
+    <data name="Tec" format="csv" label="Tec Sheet (csv)"/>
+    <data name="Ini" format="csv" label="Ini Sheet (csv)"/>
+    <data name="Liste_plantes" format="csv" label="Liste_plantes Sheet (csv)"/>
+  </outputs>
+  <tests>
+  </tests>
+  <help>
+Documentation
+-------------
+A tool to split a REDELAC xlsx INPUT file
+
+Credits
+-------
+-  Galaxy Tool Maintainer: Patrick Chabrier patrick.chabrier@inrae.fr
+-  Copyright: INRAE
+  </help>
+</tool>