Mercurial > repos > siwaa > stics4carsolel

comparison stics4carsolel.bash @ 5:ad767c79a776 draft default tip

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"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 2d336eae127279c9c61fc66d73da5d356ac95286"
author siwaa
date Tue, 03 Jan 2023 16:07:49 +0000
parents 6a77442a3598
children
comparison
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4:6a77442a3598 5:ad767c79a776
26 unzip ${station_archive} 26 unzip ${station_archive}
27 unzip ${sol_archive} 27 unzip ${sol_archive}
28 cd .. 28 cd ..
29 fi 29 fi
30 30
31 cvle -b $b_size -i ${2} -w work -P Stics4AgFlow -P CarSolEl_sim CarSolEl.vpz 31 cvle -b $b_size -i ${2} -w work -P Stics4AgFlow -P CarSolEl_sim siwaaCarSolEl.vpz
32 32
33 if [ "$OMPI_COMM_WORLD_RANK" == "0" ]; then 33 if [ "$OMPI_COMM_WORLD_RANK" == "0" ]; then
34 34
35 ls work_*/*_byUsm.txt | \ 35 ls work_*/*_byUsm.txt | \
36 xargs -t -i tail -n +2 {} | \ 36 xargs -t -i tail -n +2 {} | \
37 sort -n -k 1 -t ';' > resWithoutHeader.csv 37 sort -n -k 1 -t ';' > resWithoutHeader.csv
38 38
39 head -1 work_0/1_byUsm.txt > header.cvs 39 head -1 work_0/*_byUsm.txt > header.cvs
40 40
41 cat header.cvs resWithoutHeader.csv > res.csv 41 cat header.cvs resWithoutHeader.csv > res.csv
42 42
43 mv res.csv ${3} 43 mv res.csv ${3}
44 44