# HG changeset patch
# User siwaa
# Date 1644240590 0
# Node ID 6a77442a35989e5ea162ba5e2b69e90d22bdf7bb
# Parent  e7965152f2b01ed7b71be221cf35f849a8aad682
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 7298c614ca40b1e5bffb2a0bc6a6ea8b16b7fc37"

diff -r e7965152f2b0 -r 6a77442a3598 stics4carsolel.bash
--- a/stics4carsolel.bash	Fri Jan 28 16:12:18 2022 +0000
+++ b/stics4carsolel.bash	Mon Feb 07 13:29:50 2022 +0000
@@ -4,6 +4,8 @@
 n_slots=${1};
 csv_plan=${2};
 meteo_archive=${4};
+station_archive=${5};
+sol_archive=${6};
 sim_number=$(($(cat ${csv_plan} | wc -l) - 1));
 
 b_size=1
@@ -17,8 +19,12 @@
 
     cp -r /data/vle-2001/pkgs/CarSolEl_data/data .
     rm -rf data/meteo
+    rm -rf data/station
+    rm -rf data/sol
     cd data
     unzip ${meteo_archive}
+    unzip ${station_archive}
+    unzip ${sol_archive}
     cd ..
 fi
 
diff -r e7965152f2b0 -r 6a77442a3598 stics4carsolel.xml
--- a/stics4carsolel.xml	Fri Jan 28 16:12:18 2022 +0000
+++ b/stics4carsolel.xml	Mon Feb 07 13:29:50 2022 +0000
@@ -4,11 +4,13 @@
     <container type="singularity">docker://registry.forgemia.inra.fr/record/carsolel</container>
   </requirements>
   <command detect_errors="exit_code">
-    bash $__tool_directory__/stics4carsolel.bash \${GALAXY_SLOTS:-2} ${cvle_plan} ${output_file} ${meteo_archive};
+    bash $__tool_directory__/stics4carsolel.bash \${GALAXY_SLOTS:-2} ${cvle_plan} ${output_file} ${meteo_archive} ${station_archive} ${soil_archive};
   </command>
 <inputs>
   <param name="cvle_plan" type="data" format="csv" label="Select a cvle plan in (csv file)"/>
   <param name="meteo_archive" type="data" format="zip" label="Select a meteo archive (zip file)"/>
+  <param name="station_archive" type="data" format="zip" label="Select a station archive (zip file)"/>
+  <param name="soil_archive" type="data" format="zip" label="Select a soil archive (zip file)"/>
 </inputs>
 <outputs>
   <data format='csv' name="output_file" label="Stics simulations results"/>
@@ -17,6 +19,8 @@
   <test>
     <param name="cvle_plan" value="inputs/dummy50.csv" ftype="csv" />
     <param name="meteo_archive" value="inputs/meteo.zip" ftype="zip" />
+    <param name="station_archive" value="inputs/station.zip" ftype="zip" />
+    <param name="soil_archive" value="inputs/sol.zip" ftype="zip" />
     <output name="output_file" ftype="csv">
       <assert_contents>
         <has_n_lines n="151" />
diff -r e7965152f2b0 -r 6a77442a3598 test-data/inputs/sol.zip
Binary file test-data/inputs/sol.zip has changed
diff -r e7965152f2b0 -r 6a77442a3598 test-data/inputs/station.zip
Binary file test-data/inputs/station.zip has changed