Mercurial > repos > siwaa > wine_quality_predict

diff wine_quality_predict.xml @ 5:5024511f841e draft default tip

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planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/dnn/DNN/galaxy-tools/wine_quality_predict commit 293e7a2e4cc40479ce83dca0168d17b314f9b607
author siwaa
date Mon, 09 Dec 2024 11:26:23 +0000
parents e88a46bee6e5
children
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--- a/wine_quality_predict.xml	Mon Dec 09 10:53:55 2024 +0000
+++ b/wine_quality_predict.xml	Mon Dec 09 11:26:23 2024 +0000
@@ -17,6 +17,10 @@
     bash -e -c "source /fidle-tp/fidle-env/bin/activate &&
     mkdir datasets-fidle &&
     export FIDLE_DATASETS_DIR=\$(realpath -s datasets-fidle) &&
+    mkdir cache_dir &&
+    export TRANSFORMERS_CACHE=\$(realpath -s cache_dir) &&
+    mkdir mpl_dir &&
+    export MPLCONFIGDIR=\$(realpath -s mpl_dir) &&
     python3 /fidlemore/model_wine_lightning/wine_quality_predict.py -model_ckpt_filepath ${model_ckpt} -norm_config_json_filepath ${norm_config_json} -data_json_filepath ${data_json} &&
     cp OUTPUTS/report.json ${report_json}"
     ]]>