Mercurial > repos > siwaa > wine_quality_predict
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planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/dnn/DNN/galaxy-tools/wine_quality_predict commit e7c4e447552083db7eaecbdf139a7c359fe9becc
author | siwaa |
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date | Wed, 04 Dec 2024 15:25:16 +0000 |
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children | f9637dc4e18a |
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<tool id="wine_quality_predict" name="wine_quality_predict" version="1.0.0"> <description>wine_quality_predict</description> <requirements> <!-- singularity --> <container type="singularity">oras://registry.forgemia.inra.fr/nathalie.rousse/use/dnn_fidlemore:6d159f79349e231deadb738f79bd293c1a8dadd3</container> <!-- image locale <container type="singularity">/home/nrousse/workspace_git/SIWAA_regroup/USE_branch_dnn/use/DNN/containers/fidlemore.simg</container --> </requirements> <environment_variables> <environment_variable name="FIDLE_DATASETS_DIR">/fidle-tp/datasets-fidle</environment_variable> </environment_variables> <command detect_errors="aggressive"> <![CDATA[ . /fidle-tp/fidle-env/bin/activate; /bin/bash -c "python3 /fidlemore/model_wine_lightning/wine_quality_predict.py -model_ckpt_filepath ${model_ckpt} -norm_config_json_filepath ${norm_config_json} -data_json_filepath ${data_json}"; cp OUTPUTS/report.json ${report_json}; ]]> </command> <inputs> <param name="data_json" optional="false" type="data" format="json" label="File of data of wine whose quality to be predicted (.json)"/> <param name="model_ckpt" optional="false" type="data" format="ckpt" label="model_ckpt model file (.ckpt)"/> <param name="norm_config_json" optional="false" type="data" format="json" label="norm_config normalization configuration (.json)"/> </inputs> <outputs> <data format="json" name="report_json" label="report (.json)"/> </outputs> <tests> </tests> <help><![CDATA[ wine_quality_predict.xml =========================== Code: ---- - wine_quality_predict.py Inputs: ------- - data file (.json) : File containing data of wine for which quality is going to be predicted. - Model file (.ckpt) - Normalization configuration file (.json) Outputs: -------- - Report file (.json) Credits: -------- - Author: Nathalie Rousse nathalie.rousse@inrae.fr - Copyright: INRAE ]]> </help> </tool>