Mercurial > repos > siwaa > wine_quality_train_eval

comparison wine_quality_train_eval.xml @ 14:dcc0590d9653 draft

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planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/dnn/DNN/galaxy-tools/wine_quality_train_eval commit 1906137478520a9f71a4d8996c0a8827f27aed16-dirty
author siwaa
date Fri, 06 Dec 2024 16:43:56 +0000
parents 2f6c77865180
children c1d9515c9434
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13:2f6c77865180 14:dcc0590d9653
18 </environment_variables> 18 </environment_variables>
19 <command detect_errors="aggressive"> 19 <command detect_errors="aggressive">
20 <![CDATA[ 20 <![CDATA[
21 bash -e -c "source /fidle-tp/fidle-env/bin/activate && 21 bash -e -c "source /fidle-tp/fidle-env/bin/activate &&
22 export FIDLE_DATASETS_DIR=/fidle-tp/datasets-fidle && 22 export FIDLE_DATASETS_DIR=/fidle-tp/datasets-fidle &&
23 export IPYTHONDIR=\$(realpath -s ipython_dir) &&
24 mkdir ipython_dir &&
25 ipython profile create &&
23 mkdir cache_dir && 26 mkdir cache_dir &&
27 export TRANSFORMERS_CACHE=\$(realpath -s cache_dir) &&
24 mkdir mpl_dir && 28 mkdir mpl_dir &&
25 export TRANSFORMERS_CACHE=\$(realpath -s cache_dir) &&
26 export MPLCONFIGDIR=\$(realpath -s mpl_dir) && 29 export MPLCONFIGDIR=\$(realpath -s mpl_dir) &&
27 python3 $__tool_directory__/toto_wine_quality_train_eval.py -dataset_filepath ${dataset_csv} && 30 python3 $__tool_directory__/toto_wine_quality_train_eval.py -dataset_filepath ${dataset_csv} &&
28 cp OUTPUTS/model.ckpt ${model_ckpt} && 31 cp OUTPUTS/model.ckpt ${model_ckpt} &&
29 cp OUTPUTS/norm_config.json ${norm_config_json} && 32 cp OUTPUTS/norm_config.json ${norm_config_json} &&
30 cp OUTPUTS/report.json ${report_json}" 33 cp OUTPUTS/report.json ${report_json}"