Mercurial > repos > siwaa > carboseq_s
changeset 4:a069fc43b0b1 draft
"planemo upload for repository https://forgemia.inra.fr/carboseq/record-projet-carboseq/-/tree/ed5816b24b0c91099c78cbb5bbbe835ae5c74cd7/toos/CarboSeqSimulator commit ed5816b24b0c91099c78cbb5bbbe835ae5c74cd7-dirty"
| author | siwaa |
|---|---|
| date | Fri, 23 Aug 2024 13:19:04 +0000 |
| parents | d753f3430970 |
| children | 3e7978af2ba2 |
| files | carboseqSimulator.xml config_mappers/aial.json config_mappers/carboSeq.json config_mappers/mapper.json ontology.owl run.r semantifier.jar test-data/input/40Sites.zip test-data/input/40Sites/40Sites.zip |
| diffstat | 9 files changed, 26 insertions(+), 4054 deletions(-) [+] |
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--- a/carboseqSimulator.xml Fri Aug 23 10:09:37 2024 +0000 +++ b/carboseqSimulator.xml Fri Aug 23 13:19:04 2024 +0000 @@ -1,20 +1,14 @@ -<tool id="CarboSeqSimulator" name="CarboSeqSimulator" version="1.0.10"> +<tool id="CarboSeqSimulator" name="CarboSeqSimulator" version="1.0.11"> <description>To run the CarboSeq simulator</description> <requirements> - <container type="singularity">docker://registry.forgemia.inra.fr/csopra/csopralibs:74-considering-java21</container> + <container type="singularity">docker://registry.forgemia.inra.fr/csopra/csopralibs:siwa</container> </requirements> <command detect_errors="exit_code"><![CDATA[ - mkdir data && - cp $__tool_directory__/ontology.owl data && - cp -r $__tool_directory__/config_mappers . && - cp $__tool_directory__/semantifier.jar . && (env | grep DOCKER_IMAGE) && printf " Image Reg : \$s\n" \$(env | grep DOCKER_IMAGE) && bash -e -c "mkdir output && unzip -d input ${input} && - mkdir tmp && - export TMPDIR="\${PWD}/tmp" && - Rscript $__tool_directory__/run.r --srcDir=\$(realpath -s input) --srcOut=\$(realpath -s output) --semPath=\$(realpath -s .) --NBCores=\${GALAXY_SLOTS:-4}&& + Rscript /usr/local/src/myscripts/scenarios/run-sim-perf/run.r --srcDir=\$(realpath -s input) --srcOut=\$(realpath -s output) --semPath=\$(realpath -s .) --NBCores=\${GALAXY_SLOTS:-4}&& cp output/* ${output}" ]]> </command> @@ -29,7 +23,7 @@ <param name="input" value="input/40Sites.zip" ftype="zip" /> <output name="output" ftype="rdata" > <assert_contents> - <has_size value="1156" negate="false" /> + <has_size value="38654" negate="false" /> <has_size value="0" negate="true" /> </assert_contents> </output>
--- a/config_mappers/aial.json Fri Aug 23 10:09:37 2024 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,504 +0,0 @@ -[ - { - "extFileName": "mat_rot_cult", - "appFiles": [ - { - "appFileName": "matRotCults", - "columns": [ - { - "extColumnName": "id_profil_csopra", - "appColumnName": "id_profil_csopra", - "urifyHeader": true - }, - { - "extColumnName": "id_succession", - "appColumnName": "id_succession", - "urifyHeader": true - }, - { - "extColumnName": "id_culture", - "appColumnName": "id_culture", - "urifyHeader": true - }, - { - "extColumnName": "nom_culture", - "appColumnName": "nom_culture", - "urifyHeader": true - }, - { - "extColumnName": "type_culture", - "appColumnName": "type_culture", - "urifyHeader": true - }, - { - "extColumnName": "date_fin", - "appColumnName": "date_fin", - "urifyHeader": true - }, - { - "extColumnName": "date_fin_text", - "appColumnName": "date_fin_text", - "urifyHeader": true - }, - { - "extColumnName": "type_gestion_res", - "appColumnName": "type_gestion_res", - "urifyHeader": true - }, - { - "extColumnName": "culture_intermediaire", - "appColumnName": "culture_intermediaire", - "urifyHeader": true - }, - { - "extColumnName": "date_semis", - "appColumnName": "date_semis", - "urifyHeader": true - }, - { - "extColumnName": "date_semis_text", - "appColumnName": "date_semis_text", - "urifyHeader": true - } - ] - } - ] - }, - { - "extFileName": "mat_rot_fert_min", - "appFiles": [ - { - "appFileName": "matRotFertMin", - "columns": [ - { - "extColumnName": "id_profil_csopra", - "appColumnName": "id_profil_csopra", - "urifyHeader": true - }, - { - "extColumnName": "id_succession", - "appColumnName": "id_succession", - "urifyHeader": true - }, - { - "extColumnName": "id_ferti_min", - "appColumnName": "id_ferti_min", - "urifyHeader": true - }, - { - "extColumnName": "date_ferti_min", - "appColumnName": "date_ferti_min", - "urifyHeader": true - }, - { - "extColumnName": "dose_n", - "appColumnName": "dose_n", - "urifyHeader": true - }, - { - "extColumnName": "dose_p", - "appColumnName": "dose_p", - "urifyHeader": true - } - ] - } - ] - }, - { - "extFileName": "mat_rot_fert_org", - "appFiles": [ - { - "appFileName": "matRotFertOrg", - "columns": [ - { - "extColumnName": "id_profil_csopra", - "appColumnName": "id_profil_csopra", - "urifyHeader": true - }, - { - "extColumnName": "id_succession", - "appColumnName": "id_succession", - "urifyHeader": true - }, - { - "extColumnName": "id_ferti_org", - "appColumnName": "id_ferti_org", - "urifyHeader": true - }, - { - "extColumnName": "type_ferti_org", - "appColumnName": "type_ferti_org", - "urifyHeader": true - }, - { - "extColumnName": "date_ferti_org", - "appColumnName": "date_ferti_org", - "urifyHeader": true - }, - { - "extColumnName": "masse_carb", - "appColumnName": "masse_carb", - "urifyHeader": true - }, - { - "extColumnName": "fraction_lignine", - "appColumnName": "fraction_lignine", - "urifyHeader": true - }, - { - "extColumnName": "ratio_c_n", - "appColumnName": "ratio_c_n", - "urifyHeader": true - }, - { - "extColumnName": "ratio_c_p", - "appColumnName": "ratio_c_p", - "urifyHeader": true - }, - { - "extColumnName": "ratio_c_s", - "appColumnName": "ratio_c_s", - "urifyHeader": true - } - ] - } - ] - }, - { - "extFileName": "mat_rot_irrigation", - "appFiles": [ - { - "appFileName": "matRotIrrigation", - "columns": [ - { - "extColumnName": "id_profil_csopra", - "appColumnName": "id_profil_csopra", - "urifyHeader": true - }, - { - "extColumnName": "id_succession", - "appColumnName": "id_succession", - "urifyHeader": true - }, - { - "extColumnName": "id_irrigation", - "appColumnName": "id_irrigation", - "urifyHeader": true - }, - { - "extColumnName": "date_irrig", - "appColumnName": "date_irrig", - "urifyHeader": true - }, - { - "extColumnName": "dose_irrig", - "appColumnName": "dose_irrig", - "urifyHeader": true - } - ] - } - ] - }, - { - "extFileName": "mat_rot_obs_cult", - "appFiles": [ - { - "appFileName": "matRotObsCult", - "columns": [ - { - "extColumnName": "id_profil_csopra", - "appColumnName": "id_profil_csopra", - "index": 0, - "urifyHeader": true - }, - { - "extColumnName": "id_succession", - "appColumnName": "id_succession", - "index": 1, - "urifyHeader": true - }, - { - "extColumnName": "id_culture", - "appColumnName": "id_culture", - "index": 2, - "urifyHeader": true - }, - { - "extColumnName": "nom_culture", - "appColumnName": "nom_culture", - "index": 3, - "urifyHeader": true - }, - { - "extColumnName": "type_culture", - "appColumnName": "type_culture", - "index": 4 - }, - { - "extColumnName": "num_ordre", - "appColumnName": "num_ordre", - "index": 6, - "urifyHeader": true - }, - { - "extColumnName": "date_fin", - "appColumnName": "date_fin", - "index": 7, - "urifyHeader": true - }, - { - "extColumnName": "date_fin_text", - "appColumnName": "date_fin_text", - "index": 8, - "urifyHeader": true - }, - { - "extColumnName": "culture_intermediaire", - "appColumnName": "culture_intermediaire", - "index": 9, - "urifyHeader": true - }, - { - "extColumnName": "rendement", - "appColumnName": "rendement", - "index": 10, - "urifyHeader": true - }, - { - "extColumnName": "c_plante_aerien_c", - "appColumnName": "c_plante_aerien_c", - "index": 11, - "urifyHeader": true - }, - { - "extColumnName": "c_plante_racine_c", - "appColumnName": "c_plante_racine_c", - "index": 12, - "urifyHeader": true - }, - { - "extColumnName": "frac_of_stem_that_remains", - "appColumnName": "frac_of_stem_that_remains", - "index": 13, - "urifyHeader": true - }, - { - "extColumnName": "flag_yield_remains", - "appColumnName": "flag_yield_remains", - "index": 14, - "urifyHeader": true - }, - { - "extColumnName": "c_woody_elements", - "appColumnName": "c_woody_elements", - "index": 15, - "urifyHeader": true - } - ], - "additionalColumns": [ - { - "columnName": "weather_data_id", - "columnValue": "", - "urifyHeader": true, - "index": 5 - } - ] - } - ] - }, - { - "extFileName": "mat_rot_trav_sol", - "appFiles": [ - { - "appFileName": "matRotTravSol", - "columns": [ - { - "extColumnName": "id_profil_csopra", - "appColumnName": "id_profil_csopra", - "urifyHeader": true - }, - { - "extColumnName": "id_succession", - "appColumnName": "id_succession", - "urifyHeader": true - }, - { - "extColumnName": "id_culture", - "appColumnName": "id_culture", - "urifyHeader": true - }, - { - "extColumnName": "type_travsol", - "appColumnName": "type_travsol", - "urifyHeader": true - }, - { - "extColumnName": "date_travsol", - "appColumnName": "date_travsol", - "urifyHeader": true - } - ] - } - ] - }, - { - "extFileName": "usm_data", - "appFiles": [ - { - "appFileName": "usmData", - "columns": [ - { - "extColumnName": "id_profil_csopra", - "appColumnName": "id_profil_csopra", - "urifyHeader": true - }, - { - "extColumnName": "no_horizon", - "appColumnName": "no_horizon", - "urifyHeader": true - }, - { - "extColumnName": "prof_sup", - "appColumnName": "prof_sup", - "urifyHeader": true - }, - { - "extColumnName": "prof_inf", - "appColumnName": "prof_inf", - "urifyHeader": true - }, - { - "extColumnName": "clay", - "appColumnName": "clay", - "urifyHeader": true - }, - { - "extColumnName": "sand", - "appColumnName": "sand", - "urifyHeader": true - }, - { - "extColumnName": "silt", - "appColumnName": "silt", - "urifyHeader": true - }, - { - "extColumnName": "bulkd", - "appColumnName": "bulkd", - "urifyHeader": true - }, - { - "extColumnName": "ph", - "appColumnName": "ph", - "urifyHeader": true - } - ] - } - ] - }, - { - "extFileName": "usm_data_site_succ", - "appFiles": [ - { - "appFileName": "usmDataSiteSucc", - "columns": [ - { - "extColumnName": "id_profil_csopra", - "appColumnName": "id_profil_csopra", - "urifyHeader": true - }, - { - "extColumnName": "id_succession", - "appColumnName": "id_succession", - "urifyHeader": true - }, - { - "extColumnName": "periode_debut", - "appColumnName": "periode_debut", - "urifyHeader": true - }, - { - "extColumnName": "periode_fin", - "appColumnName": "periode_fin", - "urifyHeader": true - }, - { - "extColumnName": "latitude", - "appColumnName": "latitude", - "urifyHeader": true - }, - { - "extColumnName": "longitude", - "appColumnName": "longitude", - "urifyHeader": true - }, - { - "extColumnName": "x_lambert2_etendu", - "appColumnName": "x_lambert2_etendu", - "urifyHeader": true - }, - { - "extColumnName": "y_lambert2_etendu", - "appColumnName": "y_lambert2_etendu", - "urifyHeader": true - }, - { - "extColumnName": "drain", - "appColumnName": "drain", - "urifyHeader": true - } - ] - } - ] - }, - { - "extFileName": "usm_soil_data_timed", - "appFiles": [ - { - "appFileName": "usmSoilDataTimed", - "columns": [ - { - "extColumnName": "id_profil_csopra", - "appColumnName": "id_profil_csopra", - "urifyHeader": true - }, - { - "extColumnName": "stock_soc", - "appColumnName": "stock_soc", - "urifyHeader": true - }, - { - "extColumnName": "var_stock_soc", - "appColumnName": "var_stock_soc", - "urifyHeader": true - }, - { - "extColumnName": "date_annee", - "appColumnName": "date_annee", - "urifyHeader": true - }, - { - "extColumnName": "demi_ic_stock_soc", - "appColumnName": "demi_ic_stock_soc", - "urifyHeader": true - }, - { - "extColumnName": "d13c", - "appColumnName": "d13c", - "urifyHeader": true - }, - { - "extColumnName": "stock_n", - "appColumnName": "stock_n", - "urifyHeader": true - }, - { - "extColumnName": "c_n", - "appColumnName": "c_n", - "urifyHeader": true - } - ] - } - ] - } -]
--- a/config_mappers/carboSeq.json Fri Aug 23 10:09:37 2024 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,674 +0,0 @@ -[ - { - "extFileName": "soil_all", - "appFiles": [ - { - "appFileName": "usmDataSiteSucc", - "columns": [ - { - "extColumnName": "ID", - "appColumnName": "id_profil_csopra", - "urifyHeader": true, - "index": 0 - }, - { - "extColumnName": "LAT", - "appColumnName": "latitude", - "urifyHeader": true, - "index": 4 - }, - { - "extColumnName": "LON", - "appColumnName": "longitude", - "urifyHeader": true, - "index": 5 - } - ], - "additionalColumns": [ - { - "columnName": "id_succession", - "urifyHeader": true, - "columnValue": "1", - "index": 1 - }, - { - "columnName": "periode_debut", - "columnValue": "2000-01-01", - "index": 2 - }, - { - "columnName": "periode_fin", - "columnValue": "", - "index": 3 - }, - { - "columnName": "x_lambert2_etendu", - "columnValue": "" - }, - { - "columnName": "y_lambert2_etendu", - "columnValue": "" - }, - { - "columnName": "drain", - "columnValue": "1" - } - ] - }, - { - "appFileName": "usmData", - "columns": [ - { - "extColumnName": "ID", - "appColumnName": "id_profil_csopra", - "urifyHeader": true, - "index": 0 - }, - { - "extColumnName": "CLAY", - "appColumnName": "clay", - "urifyHeader": true, - "index": 4 - }, - { - "extColumnName": "SILT", - "appColumnName": "silt", - "urifyHeader": true, - "index": 6 - }, - { - "extColumnName": "pH", - "appColumnName": "ph", - "urifyHeader": true, - "index": 8 - } - ], - "additionalColumns": [ - { - "columnName": "no_horizon", - "columnValue": "1", - "index": 1 - }, - { - "columnName": "prof_sup", - "columnValue": "0", - "index": 2 - }, - { - "columnName": "prof_inf", - "columnValue": "30", - "index": 3 - }, - { - "columnName": "sand", - "columnValue": "", - "index": 5 - }, - { - "columnName": "bulkd", - "columnValue": "", - "index": 7 - } - ] - }, - { - "appFileName": "usmSoilDataTimed", - "columns": [ - { - "extColumnName": "ID", - "appColumnName": "id_profil_csopra", - "urifyHeader": true, - "index": 0 - }, - { - "extColumnName": "OC_THA", - "appColumnName": "stock_soc", - "urifyHeader": true, - "index": 1 - } - ], - "additionalColumns": [ - { - "columnName": "var_stock_soc", - "columnValue": "", - "index": 2 - }, - { - "columnName": "date_annee", - "columnValue": "2000-01-01", - "index": 3 - }, - { - "columnName": "demi_ic_stock_soc", - "columnValue": "", - "index": 4 - }, - { - "columnName": "d13c", - "columnValue": "", - "index": 5 - }, - { - "columnName": "stock_n", - "columnValue": "", - "index": 6 - }, - { - "columnName": "c_n", - "columnValue": "", - "index": 7 - } - ] - } - ] - }, - { - "extFileName": "crop_all", - "appFiles": [ - { - "appFileName": "matRotCults", - "columns": [ - { - "extColumnName": "ID", - "appColumnName": "id_profil_csopra", - "urifyHeader": true, - "index": 0 - }, - { - "extColumnName": "CROP", - "appColumnName": "nom_culture", - "urifyHeader": true, - "urifyValues": true, - "urifyInAdditionalRows": true, - "index": 3 - }, - { - "extColumnName": "HARVEST_DATE", - "appColumnName": "date_fin_text", - "urifyHeader": false, - "index": 6 - }, - { - "extColumnName": "SOWING_DATE", - "appColumnName": "date_semis_text", - "index": 10 - } - ], - "additionalColumns": [ - { - "columnName": "id_succession", - "urifyHeader": true, - "columnValue": "1", - "index": 1 - }, - { - "columnName": "id_culture", - "columnValue": "", - "index": 2, - "rules": [ - { - "type": "concat", - "arguments": { - "columns": "ID,id_succession,NUM", - "separator": "_", - "useCounter": false, - "constant": "" - } - } - ] - }, - { - "columnName": "type_culture", - "columnValue": "", - "index": 4 - }, - { - "columnName": "date_fin", - "columnValue": "", - "index": 5 - }, - { - "columnName": "type_gestion_res", - "columnValue": "Paille exportée", - "urifyHeader": true, - "urifyValues": true, - "urifyInAdditionalRows": true, - "index": 7 - }, - { - "columnName": "culture_intermediaire", - "columnValue": "0", - "index": 8 - }, - { - "columnName": "date_semis", - "columnValue": "", - "index": 9 - } - ], - "additionalRows": [ - { - "rules": [ - { - "type": "composite", - "arguments": { - "condition": "CI_CC > 0", - "rules": [ - { - "type": "setEmpty", - "arguments": { - "columns": "date_fin,SOWING_DATE,HARVEST_DATE" - } - }, - { - "type": "setMultipleValues", - "arguments": { - "values": [ - { - "columns": "CROP", - "constant": "Cover crop" - }, - { - "columns": "type_gestion_res", - "constant": "Laissé sur place" - }, - { - "columns": "culture_intermediaire", - "constant": "1" - } - ] - } - }, - { - "type": "concat", - "arguments": { - "columnName": "id_culture", - "columns": "ID,id_succession,NUM", - "separator": "_", - "useCounter": false, - "constant": "CC" - } - } - ] - } - } - ] - } - ] - }, - { - "appFileName": "matRotObsCult", - "columns": [ - { - "extColumnName": "ID", - "appColumnName": "id_profil_csopra", - "urifyHeader": true, - "index": 0 - }, - { - "extColumnName": "CROP", - "appColumnName": "nom_culture", - "urifyHeader": true, - "urifyValues": true, - "urifyInAdditionalRows": true, - "index": 3 - }, - { - "extColumnName": "Yield", - "appColumnName": "rendement", - "urifyHeader": true, - "index": 10 - }, - { - "extColumnName": "prop_residue_removal", - "appColumnName": "frac_of_stem_that_remains", - "index": 13, - "rules": [ - { - "type": "proportion", - "arguments": { - "columns": "prop_residue_removal", - "columnName": "prop_residue_removal" - } - } - ] - }, - { - "extColumnName": "C_WOODY_ELEMENTS", - "appColumnName": "c_woody_elements", - "urifyHeader": true, - "index": 15 - } - ], - "additionalColumns": [ - { - "columnName": "id_succession", - "urifyHeader": true, - "columnValue": "1", - "index": 1 - }, - { - "columnName": "id_culture", - "columnValue": "", - "index": 2, - "rules": [ - { - "type": "concat", - "arguments": { - "columns": "ID,id_succession,NUM", - "separator": "_", - "useCounter": false, - "constant": "" - } - } - ] - }, - { - "columnName": "type_culture", - "columnValue": "", - "index": 4 - }, - { - "columnName": "weather_data_id", - "columnValue": "", - "index": 5 - }, - { - "columnName": "num_ordre", - "columnValue": "", - "index": 6 - }, - { - "columnName": "date_fin", - "columnValue": "", - "index": 7 - }, - { - "columnName": "date_fin_text", - "columnValue": "", - "index": 8 - }, - { - "columnName": "culture_intermediaire", - "columnValue": "0", - "index": 9 - }, - { - "columnName": "c_plante_aerien_c", - "columnValue": "", - "index": 11 - }, - { - "columnName": "c_plante_racine_c", - "columnValue": "", - "index": 12 - }, - { - "columnName": "flag_yield_remains", - "columnValue": "", - "index": 14 - } - ], - "additionalRows": [ - { - "rules": [ - { - "type": "composite", - "arguments": { - "condition": "CI_CC > 0", - "rules": [ - { - "type": "setEmpty", - "arguments": { - "columns": "date_fin,SOWING_DATE,HARVEST_DATE" - } - }, - { - "type": "setMultipleValues", - "arguments": { - "values": [ - { - "columns": "CROP", - "constant": "Cover crop" - }, - { - "columns": "prop_residue_removal,culture_intermediaire", - "constant": "1" - }, - { - "columns": "C_WOODY_ELEMENTS", - "constant": "0" - }, - { - "columns": "Yield", - "columnName": "CI_CC" - } - ] - } - }, - { - "type": "concat", - "arguments": { - "columnName": "id_culture", - "columns": "ID,id_succession,NUM", - "separator": "_", - "useCounter": false, - "constant": "CC" - } - } - ] - } - } - ] - } - ] - }, - { - "appFileName": "matRotTravSol", - "columns": [ - { - "extColumnName": "ID", - "appColumnName": "id_profil_csopra", - "urifyHeader": true, - "index": 0 - } - ], - "additionalColumns": [ - { - "columnName": "id_succession", - "urifyHeader": true, - "columnValue": "1", - "index": 1 - }, - { - "columnName": "id_culture", - "index": 2, - "rules": [ - { - "type": "concat", - "arguments": { - "columns": "ID,id_succession,NUM", - "separator": "_" - } - } - ] - }, - { - "columnName": "type_travsol", - "index": 3, - "rules": [ - { - "type": "conditional", - "arguments": { - "condition": "Till = 0", - "value_if_true": { - "constant": "Zero tillage" - }, - "value_if_false": { - "constant": "Inversion tillage" - } - } - } - ] - }, - { - "columnName": "date_travsol", - "columnValue": "", - "index": 4 - } - ] - }, - { - "appFileName": "matRotIrrigation", - "columns": [ - { - "extColumnName": "ID", - "appColumnName": "id_profil_csopra", - "urifyHeader": true, - "index": 0 - }, - { - "extColumnName": "Irrig", - "appColumnName": "dose_irrig", - "urifyHeader": false, - "index": 4 - } - ], - "additionalColumns": [ - { - "columnName": "id_succession", - "urifyHeader": true, - "columnValue": "1", - "index": 1 - }, - { - "columnName": "id_irrigation", - "index": 2, - "rules": [ - { - "type": "concat", - "arguments": { - "columns": "ID,id_succession,NUM", - "separator": "_" - } - } - ] - }, - { - "columnName": "date_irrig", - "columnValue": "", - "index": 3 - } - ] - }, - { - "appFileName": "matRotFertOrg", - "columns": [ - { - "extColumnName": "ID", - "appColumnName": "id_profil_csopra", - "urifyHeader": true, - "index": 0 - }, - { - "extColumnName": "EOM_TYPE", - "appColumnName": "type_ferti_org", - "urifyHeader": false, - "urifyValues": true, - "urifyInAdditionalRows": true, - "index": 3 - }, - { - "extColumnName": "EOM_C", - "appColumnName": "masse_carb", - "index": 5 - } - ], - "additionalColumns": [ - { - "columnName": "id_succession", - "urifyHeader": true, - "columnValue": "1", - "index": 1 - }, - { - "columnName": "id_ferti_org", - "index": 2, - "rules": [ - { - "type": "concat", - "arguments": { - "columns": "ID,id_succession,NUM", - "separator": "_" - } - } - ] - }, - { - "columnName": "date_ferti_org", - "columnValue": "", - "index": 4 - }, - { - "columnName": "fraction_lignine", - "columnValue": "", - "index": 6 - }, - { - "columnName": "ratio_c_n", - "columnValue": "", - "index": 7 - }, - { - "columnName": "ratio_c_p", - "columnValue": "", - "index": 8 - }, - { - "columnName": "ratio_c_s", - "columnValue": "", - "index": 9 - } - ], - "additionalRows": [ - { - "rules": [ - { - "type": "composite", - "arguments": { - "condition": "BIOCHAR_C > 0", - "rules": [ - { - "type": "setValue", - "arguments": { - "columns": "EOM_C", - "columnName": "BIOCHAR_C" - } - }, - { - "type": "setValue", - "arguments": { - "columns": "EOM_TYPE", - "constant": "BioChar" - } - }, - { - "type": "concat", - "arguments": { - "columnName": "id_ferti_org", - "columns": "id_ferti_org", - "separator": "_", - "useCounter": false, - "constant": "BC" - } - } - ] - } - } - ] - } - ] - } - ] - } -]
--- a/config_mappers/mapper.json Fri Aug 23 10:09:37 2024 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,14 +0,0 @@ -{ - "config": { - "parallelism": { - "csv": 8, - "zip": 12 - }, - "perf-mode": 1 - }, - - "mappers": { - "carboSeq": "carboSeq.json", - "aial": "aial.json" - } -}
--- a/ontology.owl Fri Aug 23 10:09:37 2024 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,2811 +0,0 @@ -<rdf:RDF - xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" - xmlns:csopra="http://csopralibs.org#" - xmlns:j.0="http://opendata.inra.fr/anaeeOnto#" - xmlns:owl="http://www.w3.org/2002/07/owl#" - xmlns:skos="http://www.w3.org/2004/02/skos/core#" - xmlns:oboe="http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#" - xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" - xmlns:xsd="http://www.w3.org/2001/XMLSchema#"> - <owl:Ontology rdf:about="http://csopralibs.org#"> - <owl:imports rdf:resource="http://purl.obolibrary.org/obo/agro/releases/2021-11-05/agro.owl"/> - <owl:imports rdf:resource="https://forgemia.inra.fr/anaee-dev/coby_use-cases/-/raw/master/SI/OBOE1.2/ontology/ontology.owl"/> - <owl:imports rdf:resource="http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl"/> - </owl:Ontology> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#AlliumCepa"> - <skos:altLabel>alliumcepa</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>onions</skos:altLabel> - <skos:prefLabel>Allium cepa</skos:prefLabel> - <skos:altLabel>AlliumCepa</skos:altLabel> - <skos:altLabel>allium cepa</skos:altLabel> - <skos:altLabel>onion</skos:altLabel> - <skos:altLabel>Allium cepa</skos:altLabel> - <rdfs:label>AlliumCepa</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Id"> - <rdfs:comment>Unique identifier used for designating a simulation site, that is, a 10x10 km pixel. -</rdfs:comment> - <skos:altLabel>id</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#FileInputs"/> - </rdfs:subClassOf> - <skos:altLabel>Id</skos:altLabel> - <skos:altLabel>id_profil_csopra</skos:altLabel> - <skos:prefLabel>Id</skos:prefLabel> - <rdf:type rdf:resource="http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#Measurement"/> - <skos:altLabel>ID</skos:altLabel> - <rdfs:label>Id</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#LactucaSativaVar.Crispa"> - <skos:altLabel>leaf lettuce</skos:altLabel> - <skos:altLabel>lactuca sativa var. crispa</skos:altLabel> - <skos:altLabel>Lactuca sativa var. crispa</skos:altLabel> - <skos:prefLabel>Lactuca sativa var. crispa</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>lactucasativavar.crispa</skos:altLabel> - <skos:altLabel>LactucaSativaVar.Crispa</skos:altLabel> - <rdfs:label>LactucaSativaVar.Crispa</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#GrasslandArea"> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>green fallow</skos:altLabel> - <skos:altLabel>grasslandarea</skos:altLabel> - <skos:prefLabel>Grassland area</skos:prefLabel> - <skos:altLabel>ray</skos:altLabel> - <skos:altLabel>GrasslandArea</skos:altLabel> - <skos:altLabel>pasture</skos:altLabel> - <skos:altLabel>Grassland area</skos:altLabel> - <skos:altLabel>extensive grassland</skos:altLabel> - <skos:altLabel>mowing pasture</skos:altLabel> - <skos:altLabel>ryegrass</skos:altLabel> - <rdfs:label>GrasslandArea</rdfs:label> - <skos:altLabel>grassland area</skos:altLabel> - <skos:altLabel>Ray</skos:altLabel> - <skos:altLabel>grassland annual</skos:altLabel> - <skos:altLabel>sedge</skos:altLabel> - <skos:altLabel>ryegrass annual</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#BrassicaOleraceaVar.Italica"> - <skos:altLabel>broccoli</skos:altLabel> - <skos:altLabel>brassica oleracea var. italica</skos:altLabel> - <skos:altLabel>Brassica oleracea var. italica</skos:altLabel> - <skos:prefLabel>Brassica oleracea var. italica</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>brassicaoleraceavar.italica</skos:altLabel> - <skos:altLabel>BrassicaOleraceaVar.Italica</skos:altLabel> - <rdfs:label>BrassicaOleraceaVar.Italica</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#SinapisAlba"> - <skos:altLabel>Moutarde blanche</skos:altLabel> - <skos:altLabel>white mustard</skos:altLabel> - <rdfs:label>SinapisAlba</rdfs:label> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>sinapisalba</skos:altLabel> - <skos:altLabel>sinapis alba</skos:altLabel> - <skos:altLabel>Sinapis alba</skos:altLabel> - <skos:altLabel>moutarde blanche</skos:altLabel> - <skos:prefLabel>Sinapis alba</skos:prefLabel> - <skos:altLabel>SinapisAlba</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CompostedBovineSolidManure"> - <skos:prefLabel>Composted bovine solid manure</skos:prefLabel> - <skos:altLabel>compost de fumier</skos:altLabel> - <skos:altLabel>compost de fumier de bovins</skos:altLabel> - <skos:altLabel>CompostedBovineSolidManure</skos:altLabel> - <skos:altLabel>compostedbovinesolidmanure</skos:altLabel> - <rdfs:label>CompostedBovineSolidManure</rdfs:label> - <skos:altLabel>CFB</skos:altLabel> - <skos:altLabel>composted bovine solid manure</skos:altLabel> - <skos:altLabel>cfb</skos:altLabel> - <skos:altLabel>Composted bovine solid manure</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#Compost"/> - </rdfs:subClassOf> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#TriticumSpelta"> - <skos:altLabel>triticum spelta</skos:altLabel> - <skos:altLabel>triticumspelta</skos:altLabel> - <skos:altLabel>TriticumSpelta</skos:altLabel> - <rdfs:label>TriticumSpelta</rdfs:label> - <skos:altLabel>dinkel wheat</skos:altLabel> - <skos:prefLabel>Triticum spelta</skos:prefLabel> - <skos:altLabel>spelt</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>Triticum spelta</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Variable"> - <skos:prefLabel>Variable</skos:prefLabel> - <skos:altLabel>variable</skos:altLabel> - <skos:altLabel>Variable</skos:altLabel> - <rdfs:label>Variable</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SoilOrganicCarbonStock"> - <skos:altLabel>soilorganiccarbonstock</skos:altLabel> - <oboe:hasMeasurement> - <oboe:Measurement rdf:about="http://csopralibs.org#CMassMeas"> - <skos:altLabel>oc_tha</skos:altLabel> - <skos:altLabel>CMassMeas</skos:altLabel> - <oboe:usesStandard> - <owl:Class rdf:about="http://csopralibs.org#MegagramPerHectare"/> - </oboe:usesStandard> - <rdfs:label>CMassMeas</rdfs:label> - <skos:prefLabel>CMassMeas</skos:prefLabel> - <skos:altLabel>OC_THA</skos:altLabel> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - <skos:altLabel>cmassmeas</skos:altLabel> - <skos:altLabel>stock_soc</skos:altLabel> - </oboe:Measurement> - </oboe:hasMeasurement> - <rdfs:comment>Generic soil organic stock. Should have an informed soil layer attached to it. - -</rdfs:comment> - <skos:altLabel>SoilOrganicCarbonStock</skos:altLabel> - <rdf:type rdf:resource="http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#Observation"/> - <oboe:hasContext> - <oboe:Observation rdf:about="http://csopralibs.org#SoilLayerObs"> - <oboe:ofEntity rdf:resource="http://csopralibs.org#SoilLayer"/> - <oboe:hasMeasurement> - <oboe:Measurement rdf:about="http://csopralibs.org#SOCMaxDepthMeas"> - <oboe:ofCharacteristic> - <owl:Class rdf:about="http://csopralibs.org#DepthRelativeToSurface"/> - </oboe:ofCharacteristic> - <skos:prefLabel>SOCMaxDepthMeas</skos:prefLabel> - <j.0:hasMeasurementQualifier> - <owl:Class rdf:about="http://csopralibs.org#Max"/> - </j.0:hasMeasurementQualifier> - <skos:altLabel>socmaxdepthmeas</skos:altLabel> - <skos:altLabel>SOCMaxDepthMeas</skos:altLabel> - <rdfs:label>SOCMaxDepthMeas</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </oboe:Measurement> - </oboe:hasMeasurement> - <oboe:hasMeasurement> - <oboe:Measurement rdf:about="http://csopralibs.org#MaxDepthMeas"> - <oboe:ofCharacteristic> - <owl:Class rdf:about="http://csopralibs.org#DepthRelativeToSurface"/> - </oboe:ofCharacteristic> - <skos:prefLabel>MaxDepthMeas</skos:prefLabel> - <j.0:hasMeasurementQualifier> - <owl:Class rdf:about="http://csopralibs.org#Max"/> - </j.0:hasMeasurementQualifier> - <skos:altLabel>maxdepthmeas</skos:altLabel> - <skos:altLabel>MaxDepthMeas</skos:altLabel> - <rdfs:label>MaxDepthMeas</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </oboe:Measurement> - </oboe:hasMeasurement> - <skos:altLabel>soillayerobs</skos:altLabel> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - <oboe:hasMeasurement> - <oboe:Measurement rdf:about="http://csopralibs.org#MinDepthMeas"> - <oboe:ofCharacteristic> - <owl:Class rdf:about="http://csopralibs.org#DepthRelativeToSurface"/> - </oboe:ofCharacteristic> - <skos:prefLabel>MinDepthMeas</skos:prefLabel> - <j.0:hasMeasurementQualifier> - <owl:Class rdf:about="http://csopralibs.org#Min"/> - </j.0:hasMeasurementQualifier> - <skos:altLabel>mindepthmeas</skos:altLabel> - <skos:altLabel>MinDepthMeas</skos:altLabel> - <rdfs:label>MinDepthMeas</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </oboe:Measurement> - </oboe:hasMeasurement> - <skos:prefLabel>SoilLayerObs</skos:prefLabel> - <rdfs:label>SoilLayerObs</rdfs:label> - <skos:altLabel>SoilLayerObs</skos:altLabel> - <oboe:hasMeasurement> - <oboe:Measurement rdf:about="http://csopralibs.org#SOCMinDepthMeas"> - <oboe:ofCharacteristic> - <owl:Class rdf:about="http://csopralibs.org#DepthRelativeToSurface"/> - </oboe:ofCharacteristic> - <skos:prefLabel>SOCMinDepthMeas</skos:prefLabel> - <j.0:hasMeasurementQualifier> - <owl:Class rdf:about="http://csopralibs.org#Min"/> - </j.0:hasMeasurementQualifier> - <skos:altLabel>socmindepthmeas</skos:altLabel> - <skos:altLabel>SOCMinDepthMeas</skos:altLabel> - <rdfs:label>SOCMinDepthMeas</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </oboe:Measurement> - </oboe:hasMeasurement> - </oboe:Observation> - </oboe:hasContext> - <skos:prefLabel>SoilOrganicCarbonStock</skos:prefLabel> - <oboe:ofEntity rdf:resource="http://csopralibs.org#Variable"/> - <rdfs:label>SoilOrganicCarbonStock</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Max"> - <skos:prefLabel>Max</skos:prefLabel> - <skos:altLabel>max</skos:altLabel> - <skos:altLabel>Max</skos:altLabel> - <rdfs:label>Max</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#TrifoliumRepens"> - <skos:altLabel>white clover</skos:altLabel> - <skos:altLabel>trifolium repens</skos:altLabel> - <skos:altLabel>Trifolium repens</skos:altLabel> - <skos:prefLabel>Trifolium repens</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>trifoliumrepens</skos:altLabel> - <skos:altLabel>TrifoliumRepens</skos:altLabel> - <rdfs:label>TrifoliumRepens</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#NUM"> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#FileInputs"/> - </rdfs:subClassOf> - <rdfs:comment>Year number in the 20-year crop rotations (1-20). -</rdfs:comment> - <skos:prefLabel>NUM</skos:prefLabel> - <skos:altLabel>num</skos:altLabel> - <skos:altLabel>NUM</skos:altLabel> - <rdfs:label>NUM</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#Lupinus"> - <skos:altLabel>lupine</skos:altLabel> - <skos:prefLabel>Lupinus</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>lupinus</skos:altLabel> - <skos:altLabel>Lupinus</skos:altLabel> - <rdfs:label>Lupinus</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CI_CC"> - <skos:altLabel>cover crop</skos:altLabel> - <skos:altLabel>intermediate crop</skos:altLabel> - <skos:altLabel>ci_cc</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#FileInputs"/> - </rdfs:subClassOf> - <skos:prefLabel>CI_CC</skos:prefLabel> - <skos:altLabel>CI_CC</skos:altLabel> - <rdfs:comment>Amount of organic matter input through intermediate crops. Unit: t/ha/yr. -</rdfs:comment> - <rdfs:label>CI_CC</rdfs:label> - <skos:altLabel>Cover crop</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#ShrubFruit"> - <skos:altLabel>shrub fruit</skos:altLabel> - <skos:altLabel>Shrub fruit</skos:altLabel> - <skos:prefLabel>Shrub fruit</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>shrubfruit</skos:altLabel> - <skos:altLabel>ShrubFruit</skos:altLabel> - <rdfs:label>ShrubFruit</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SugarBeetVinasse"> - <skos:altLabel>sugar beet vinasse</skos:altLabel> - <skos:altLabel>Sugar beet vinasse</skos:altLabel> - <skos:prefLabel>Sugar beet vinasse</skos:prefLabel> - <skos:altLabel>sugarbeetvinasse</skos:altLabel> - <skos:altLabel>SugarBeetVinasse</skos:altLabel> - <rdfs:label>SugarBeetVinasse</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Sludge"> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#CarbonInputFromOrganicFertilization"/> - </rdfs:subClassOf> - <skos:prefLabel>Sludge</skos:prefLabel> - <skos:altLabel>sludge</skos:altLabel> - <skos:altLabel>Sludge</skos:altLabel> - <rdfs:label>Sludge</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#SpinaciaOleracea"> - <skos:altLabel>spinach</skos:altLabel> - <skos:altLabel>spinacia oleracea</skos:altLabel> - <skos:altLabel>Spinacia oleracea</skos:altLabel> - <skos:prefLabel>Spinacia oleracea</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>spinaciaoleracea</skos:altLabel> - <skos:altLabel>SpinaciaOleracea</skos:altLabel> - <rdfs:label>SpinaciaOleracea</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Compost"> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#CarbonInputFromOrganicFertilization"/> - </rdfs:subClassOf> - <skos:prefLabel>Compost</skos:prefLabel> - <skos:altLabel>compost</skos:altLabel> - <skos:altLabel>Compost</skos:altLabel> - <rdfs:label>Compost</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#FullTillage"> - <skos:altLabel>full tillage</skos:altLabel> - <skos:altLabel>Full tillage</skos:altLabel> - <skos:prefLabel>Full tillage</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#SoilTillage"/> - </rdfs:subClassOf> - <skos:altLabel>fulltillage</skos:altLabel> - <skos:altLabel>FullTillage</skos:altLabel> - <rdfs:label>FullTillage</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#GreenWasteAndBiowasteCompost"> - <rdfs:label>GreenWasteAndBiowasteCompost</rdfs:label> - <skos:altLabel>green waste and biowaste compost</skos:altLabel> - <skos:altLabel>BIOW-Qua</skos:altLabel> - <skos:altLabel>GreenWasteAndBiowasteCompost</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>bio</skos:altLabel> - <skos:altLabel>Green waste and biowaste compost</skos:altLabel> - <skos:altLabel>bio_feucherolles</skos:altLabel> - <skos:altLabel>BIO</skos:altLabel> - <skos:altLabel>greenwasteandbiowastecompost</skos:altLabel> - <skos:altLabel>biow-qua</skos:altLabel> - <skos:prefLabel>Green waste and biowaste compost</skos:prefLabel> - <skos:altLabel>BIO_Feucherolles</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#TrifoliumPratense"> - <skos:altLabel>red clover</skos:altLabel> - <skos:altLabel>trifolium pratense</skos:altLabel> - <skos:altLabel>Trifolium pratense</skos:altLabel> - <skos:prefLabel>Trifolium pratense</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>trifoliumpratense</skos:altLabel> - <skos:altLabel>TrifoliumPratense</skos:altLabel> - <rdfs:label>TrifoliumPratense</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#BrassicaOleraceaVar.Botrytis"> - <skos:altLabel>brassica oleracea var. botrytis</skos:altLabel> - <skos:altLabel>caouliflower</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>cauliflower</skos:altLabel> - <skos:altLabel>BrassicaOleraceaVar.Botrytis</skos:altLabel> - <skos:altLabel>brassicaoleraceavar.botrytis</skos:altLabel> - <rdfs:label>BrassicaOleraceaVar.Botrytis</rdfs:label> - <skos:altLabel>Brassica oleracea var. botrytis</skos:altLabel> - <skos:prefLabel>Brassica oleracea var. botrytis</skos:prefLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#DactylisGlomerata"> - <skos:altLabel>orchard grass</skos:altLabel> - <skos:altLabel>dactylis glomerata</skos:altLabel> - <skos:altLabel>Dactylis glomerata</skos:altLabel> - <skos:prefLabel>Dactylis glomerata</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>dactylisglomerata</skos:altLabel> - <skos:altLabel>DactylisGlomerata</skos:altLabel> - <rdfs:label>DactylisGlomerata</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#EOM_TYPE"> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#FileInputs"/> - </rdfs:subClassOf> - <rdfs:comment>Type of organic fertilization. See the list of Organic products in the ontology. -</rdfs:comment> - <skos:prefLabel>EOM_TYPE</skos:prefLabel> - <skos:altLabel>eom_type</skos:altLabel> - <skos:altLabel>EOM_TYPE</skos:altLabel> - <rdfs:label>EOM_TYPE</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Millimeter"> - <skos:altLabel>mm</skos:altLabel> - <skos:prefLabel>Millimeter</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#Units"/> - </rdfs:subClassOf> - <skos:altLabel>millimeter</skos:altLabel> - <skos:altLabel>Millimeter</skos:altLabel> - <rdfs:label>Millimeter</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CommercialOrganicFertilizer"> - <skos:altLabel>commercial organic fertilizer</skos:altLabel> - <skos:altLabel>Commercial organic fertilizer</skos:altLabel> - <skos:prefLabel>Commercial organic fertilizer</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#OtherOrganicProducts"/> - </rdfs:subClassOf> - <skos:altLabel>commercialorganicfertilizer</skos:altLabel> - <skos:altLabel>CommercialOrganicFertilizer</skos:altLabel> - <rdfs:label>CommercialOrganicFertilizer</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Agro-industrialWastewater"> - <skos:altLabel>agro-industrial wastewater</skos:altLabel> - <skos:altLabel>Agro-industrial wastewater</skos:altLabel> - <skos:prefLabel>Agro-industrial wastewater</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#OtherOrganicProducts"/> - </rdfs:subClassOf> - <skos:altLabel>agro-industrialwastewater</skos:altLabel> - <skos:altLabel>Agro-industrialWastewater</skos:altLabel> - <rdfs:label>Agro-industrialWastewater</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#FileInputs"> - <skos:altLabel>file inputs</skos:altLabel> - <skos:altLabel>File inputs</skos:altLabel> - <skos:prefLabel>File inputs</skos:prefLabel> - <skos:altLabel>fileinputs</skos:altLabel> - <skos:altLabel>FileInputs</skos:altLabel> - <rdfs:label>FileInputs</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SoilTillage"> - <skos:altLabel>soil tillage</skos:altLabel> - <skos:altLabel>Soil tillage</skos:altLabel> - <skos:prefLabel>Soil tillage</skos:prefLabel> - <skos:altLabel>soiltillage</skos:altLabel> - <skos:altLabel>SoilTillage</skos:altLabel> - <rdfs:label>SoilTillage</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#BovineSolidManure"> - <skos:altLabel>DVB_Feucherolles</skos:altLabel> - <skos:altLabel>bovine compost</skos:altLabel> - <skos:altLabel>Bovine solid manure</skos:altLabel> - <skos:altLabel>FB_Feucherolles</skos:altLabel> - <skos:altLabel>fb_feucherolles</skos:altLabel> - <skos:altLabel>bovinesolidmanure</skos:altLabel> - <skos:altLabel>fumier de bovin</skos:altLabel> - <skos:altLabel>BovineSolidManure</skos:altLabel> - <rdfs:label>BovineSolidManure</rdfs:label> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#AnimalManure"/> - </rdfs:subClassOf> - <skos:altLabel>fumier de bovins (génisses)</skos:altLabel> - <skos:altLabel>bovine solid manure</skos:altLabel> - <skos:altLabel>fym-qua</skos:altLabel> - <skos:altLabel>FYM-Qua</skos:altLabel> - <skos:altLabel>fumier de bovins</skos:altLabel> - <skos:altLabel>dvb</skos:altLabel> - <skos:altLabel>DVB</skos:altLabel> - <skos:prefLabel>Bovine solid manure</skos:prefLabel> - <skos:altLabel>dvb_feucherolles</skos:altLabel> - <skos:altLabel>default_FYM</skos:altLabel> - <skos:altLabel>fb</skos:altLabel> - <skos:altLabel>FB</skos:altLabel> - <skos:altLabel>default_fym</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#WinterBarley"> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>Winter barley</skos:altLabel> - <skos:prefLabel>Winter barley</skos:prefLabel> - <skos:altLabel>WinterBarley</skos:altLabel> - <skos:altLabel>Orge Hiver</skos:altLabel> - <rdfs:label>WinterBarley</rdfs:label> - <skos:altLabel>winter barley</skos:altLabel> - <skos:altLabel>winterbarley</skos:altLabel> - <skos:altLabel>orge hiver</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CarbonInputFromOrganicFertilization"> - <skos:prefLabel>Carbon Input From Organic fertilization</skos:prefLabel> - <skos:altLabel>carbon input from organic fertilization</skos:altLabel> - <skos:altLabel>carboninputfromorganicfertilization</skos:altLabel> - <rdfs:label>CarbonInputFromOrganicFertilization</rdfs:label> - <rdf:type rdf:resource="http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#Observation"/> - <oboe:ofEntity rdf:resource="http://csopralibs.org#CarbonInputFromOrganicFertilization"/> - <skos:altLabel>Carbon Input From Organic fertilization</skos:altLabel> - <skos:altLabel>CarbonInputFromOrganicFertilization</skos:altLabel> - <oboe:hasMeasurement> - <oboe:Measurement rdf:about="http://csopralibs.org#CFluxFromOrganicFertilization"> - <skos:altLabel>eom_c</skos:altLabel> - <skos:altLabel>EOM_C</skos:altLabel> - <skos:prefLabel>CFluxFromOrganicFertilization</skos:prefLabel> - <oboe:usesStandard> - <owl:Class rdf:about="http://csopralibs.org#MegagramPerHectarePerYear"/> - </oboe:usesStandard> - <skos:altLabel>cfluxfromorganicfertilization</skos:altLabel> - <skos:altLabel>CFluxFromOrganicFertilization</skos:altLabel> - <rdfs:label>CFluxFromOrganicFertilization</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </oboe:Measurement> - </oboe:hasMeasurement> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#SolanumLycopersicum"> - <skos:altLabel>tomato</skos:altLabel> - <skos:altLabel>solanum lycopersicum</skos:altLabel> - <skos:altLabel>Solanum lycopersicum</skos:altLabel> - <skos:prefLabel>Solanum lycopersicum</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>solanumlycopersicum</skos:altLabel> - <skos:altLabel>SolanumLycopersicum</skos:altLabel> - <rdfs:label>SolanumLycopersicum</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Biochar"> - <skos:altLabel>BioChar</skos:altLabel> - <skos:prefLabel>Biochar</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#CarbonInputObs"/> - </rdfs:subClassOf> - <skos:altLabel>biochar</skos:altLabel> - <skos:altLabel>Biochar</skos:altLabel> - <rdfs:label>Biochar</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Conversion"/> - <owl:Class rdf:about="http://csopralibs.org#Rainfall"> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#Climate"/> - </rdfs:subClassOf> - <skos:altLabel>rr</skos:altLabel> - <skos:altLabel>RR</skos:altLabel> - <skos:prefLabel>Rainfall</skos:prefLabel> - <oboe:Measurement> - <oboe:Measurement rdf:about="http://csopralibs.org#RainfallMeas"> - <rdfs:comment>Total rainfall in mm per month -</rdfs:comment> - <skos:prefLabel>RainfallMeas</skos:prefLabel> - <oboe:usesStandard> - <owl:Class rdf:about="http://csopralibs.org#MillimeterPerMonth"/> - </oboe:usesStandard> - <skos:altLabel>rainfallmeas</skos:altLabel> - <skos:altLabel>RainfallMeas</skos:altLabel> - <rdfs:label>RainfallMeas</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </oboe:Measurement> - </oboe:Measurement> - <skos:altLabel>rainfall</skos:altLabel> - <skos:altLabel>Rainfall</skos:altLabel> - <rdfs:label>Rainfall</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Climate"> - <skos:prefLabel>Climate</skos:prefLabel> - <skos:altLabel>climate</skos:altLabel> - <skos:altLabel>Climate</skos:altLabel> - <rdfs:label>Climate</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#BrassicaOleraceaVar.Medullosa"> - <skos:altLabel>marrow-stem kale</skos:altLabel> - <skos:altLabel>brassica oleracea var. medullosa</skos:altLabel> - <skos:altLabel>Brassica oleracea var. medullosa</skos:altLabel> - <skos:prefLabel>Brassica oleracea var. medullosa</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>brassicaoleraceavar.medullosa</skos:altLabel> - <skos:altLabel>BrassicaOleraceaVar.Medullosa</skos:altLabel> - <rdfs:label>BrassicaOleraceaVar.Medullosa</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#RawDigestateOfBiowasteAndOtherWastes"> - <skos:altLabel>raw digestate of biowaste and other wastes</skos:altLabel> - <skos:altLabel>Raw digestate of biowaste and other wastes</skos:altLabel> - <skos:prefLabel>Raw digestate of biowaste and other wastes</skos:prefLabel> - <skos:altLabel>rawdigestateofbiowasteandotherwastes</skos:altLabel> - <skos:altLabel>RawDigestateOfBiowasteAndOtherWastes</skos:altLabel> - <rdfs:label>RawDigestateOfBiowasteAndOtherWastes</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#OtherVegetalResidue"> - <skos:altLabel>other vegetal residue</skos:altLabel> - <skos:altLabel>Other vegetal residue</skos:altLabel> - <skos:prefLabel>Other vegetal residue</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#VegetalResidue"/> - </rdfs:subClassOf> - <skos:altLabel>othervegetalresidue</skos:altLabel> - <skos:altLabel>OtherVegetalResidue</skos:altLabel> - <rdfs:label>OtherVegetalResidue</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#RawDigestateOfLivestockEffluentsAndOtherWastes"> - <skos:altLabel>raw digestate of livestock effluents and other wastes</skos:altLabel> - <skos:altLabel>Raw digestate of livestock effluents and other wastes</skos:altLabel> - <skos:prefLabel>Raw digestate of livestock effluents and other wastes</skos:prefLabel> - <skos:altLabel>rawdigestateoflivestockeffluentsandotherwastes</skos:altLabel> - <skos:altLabel>RawDigestateOfLivestockEffluentsAndOtherWastes</skos:altLabel> - <rdfs:label>RawDigestateOfLivestockEffluentsAndOtherWastes</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#WinterTurnip"> - <skos:altLabel>winter turnip</skos:altLabel> - <skos:altLabel>Winter turnip</skos:altLabel> - <skos:prefLabel>Winter turnip</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>winterturnip</skos:altLabel> - <skos:altLabel>WinterTurnip</skos:altLabel> - <rdfs:label>WinterTurnip</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#DriedChickenDroppings"> - <skos:altLabel>dried chicken droppings</skos:altLabel> - <skos:altLabel>Dried chicken droppings</skos:altLabel> - <skos:prefLabel>Dried chicken droppings</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#AnimalManure"/> - </rdfs:subClassOf> - <skos:altLabel>driedchickendroppings</skos:altLabel> - <skos:altLabel>DriedChickenDroppings</skos:altLabel> - <rdfs:label>DriedChickenDroppings</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Whole-plantSilageRye"> - <skos:altLabel>whole-plant silage rye</skos:altLabel> - <skos:altLabel>Whole-plant silage rye</skos:altLabel> - <skos:prefLabel>Whole-plant silage rye</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>whole-plantsilagerye</skos:altLabel> - <skos:altLabel>Whole-plantSilageRye</skos:altLabel> - <rdfs:label>Whole-plantSilageRye</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#GuizotiaAbyssinica"> - <skos:altLabel>ramtilla</skos:altLabel> - <skos:altLabel>guizotia abyssinica</skos:altLabel> - <skos:altLabel>Guizotia abyssinica</skos:altLabel> - <skos:prefLabel>Guizotia abyssinica</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>guizotiaabyssinica</skos:altLabel> - <skos:altLabel>GuizotiaAbyssinica</skos:altLabel> - <rdfs:label>GuizotiaAbyssinica</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SheepManure"> - <skos:altLabel>sheep manure</skos:altLabel> - <skos:altLabel>Sheep manure</skos:altLabel> - <skos:prefLabel>Sheep manure</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#AnimalManure"/> - </rdfs:subClassOf> - <skos:altLabel>sheepmanure</skos:altLabel> - <skos:altLabel>SheepManure</skos:altLabel> - <rdfs:label>SheepManure</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#BareFallow"> - <skos:altLabel>sol nu</skos:altLabel> - <skos:altLabel>Sol nu</skos:altLabel> - <skos:altLabel>bare fallow</skos:altLabel> - <skos:altLabel>Bare fallow</skos:altLabel> - <skos:prefLabel>Bare fallow</skos:prefLabel> - <skos:altLabel>barefallow</skos:altLabel> - <skos:altLabel>BareFallow</skos:altLabel> - <rdfs:label>BareFallow</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Id_succession"> - <skos:prefLabel>Id_succession</skos:prefLabel> - <skos:altLabel>id_succession</skos:altLabel> - <skos:altLabel>Id_succession</skos:altLabel> - <rdfs:label>Id_succession</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#LinumUsitatissimum"> - <skos:altLabel>flax</skos:altLabel> - <skos:altLabel>linum usitatissimum</skos:altLabel> - <skos:altLabel>Linum usitatissimum</skos:altLabel> - <skos:prefLabel>Linum usitatissimum</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>linumusitatissimum</skos:altLabel> - <skos:altLabel>LinumUsitatissimum</skos:altLabel> - <rdfs:label>LinumUsitatissimum</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#OtherAnimalManure"> - <skos:altLabel>other animal manure</skos:altLabel> - <skos:altLabel>Other animal manure</skos:altLabel> - <skos:prefLabel>Other animal manure</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#AnimalManure"/> - </rdfs:subClassOf> - <skos:altLabel>otheranimalmanure</skos:altLabel> - <skos:altLabel>OtherAnimalManure</skos:altLabel> - <rdfs:label>OtherAnimalManure</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#VegetalResidue"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#CarbonInputFromOrganicFertilization"/> - <skos:altLabel>vegetal residue</skos:altLabel> - <skos:altLabel>Vegetal residue</skos:altLabel> - <skos:prefLabel>Vegetal residue</skos:prefLabel> - <skos:altLabel>vegetalresidue</skos:altLabel> - <skos:altLabel>VegetalResidue</skos:altLabel> - <rdfs:label>VegetalResidue</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#LiquidPhaseOfDigestateOfBiowasteAndOtherWastes"> - <skos:altLabel>liquid phase of digestate of biowaste and other wastes</skos:altLabel> - <skos:altLabel>Liquid phase of digestate of biowaste and other wastes</skos:altLabel> - <skos:prefLabel>Liquid phase of digestate of biowaste and other wastes</skos:prefLabel> - <skos:altLabel>liquidphaseofdigestateofbiowasteandotherwastes</skos:altLabel> - <skos:altLabel>LiquidPhaseOfDigestateOfBiowasteAndOtherWastes</skos:altLabel> - <rdfs:label>LiquidPhaseOfDigestateOfBiowasteAndOtherWastes</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#LegumeMixture"> - <skos:altLabel>legume mixture</skos:altLabel> - <skos:altLabel>Legume mixture</skos:altLabel> - <skos:prefLabel>Legume mixture</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>legumemixture</skos:altLabel> - <skos:altLabel>LegumeMixture</skos:altLabel> - <rdfs:label>LegumeMixture</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#WinterRye"> - <skos:altLabel>winter rye</skos:altLabel> - <skos:altLabel>Winter rye</skos:altLabel> - <skos:prefLabel>Winter rye</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>winterrye</skos:altLabel> - <skos:altLabel>WinterRye</skos:altLabel> - <rdfs:label>WinterRye</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#ViciaLens"> - <skos:altLabel>Vicia lens</skos:altLabel> - <skos:altLabel>lentils</skos:altLabel> - <skos:altLabel>vicia lens</skos:altLabel> - <skos:altLabel>lentil</skos:altLabel> - <rdfs:label>ViciaLens</rdfs:label> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>vicialens</skos:altLabel> - <skos:altLabel>ViciaLens</skos:altLabel> - <skos:prefLabel>Vicia lens</skos:prefLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Year"> - <skos:prefLabel>Year</skos:prefLabel> - <skos:altLabel>year</skos:altLabel> - <skos:altLabel>Year</skos:altLabel> - <rdfs:label>Year</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#OtherAnimalResidue"> - <skos:altLabel>other animal residue</skos:altLabel> - <skos:altLabel>Other animal residue</skos:altLabel> - <skos:prefLabel>Other animal residue</skos:prefLabel> - <skos:altLabel>otheranimalresidue</skos:altLabel> - <skos:altLabel>OtherAnimalResidue</skos:altLabel> - <rdfs:label>OtherAnimalResidue</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#clay"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#FileInputs"/> - <rdfs:comment>Amount of clay. Unit: %. -</rdfs:comment> - <skos:altLabel>CLAY</skos:altLabel> - <skos:prefLabel>clay</skos:prefLabel> - <skos:altLabel>clay</skos:altLabel> - <rdfs:label>clay</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#Legume(whole)"> - <rdfs:label>Legume(whole)</rdfs:label> - <skos:altLabel>Legume(whole)</skos:altLabel> - <skos:altLabel>Legume (whole)</skos:altLabel> - <skos:altLabel>legume hay</skos:altLabel> - <skos:prefLabel>Legume (whole)</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>grassland with legumes</skos:altLabel> - <skos:altLabel>legume(whole)</skos:altLabel> - <skos:altLabel>legume (whole)</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#SolanumTuberosum"> - <skos:altLabel>potatoes</skos:altLabel> - <skos:altLabel>Solanum tuberosum</skos:altLabel> - <skos:altLabel>potato</skos:altLabel> - <rdfs:label>SolanumTuberosum</rdfs:label> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>Pomme de terre Plants</skos:altLabel> - <skos:prefLabel>Solanum tuberosum</skos:prefLabel> - <skos:altLabel>SolanumTuberosum</skos:altLabel> - <skos:altLabel>solanum tuberosum</skos:altLabel> - <skos:altLabel>pomme de terre plants</skos:altLabel> - <skos:altLabel>solanumtuberosum</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#MinimumTemperature"> - <skos:altLabel>Minimum temperature</skos:altLabel> - <rdfs:label>MinimumTemperature</rdfs:label> - <skos:altLabel>minimum temperature</skos:altLabel> - <skos:altLabel>TN</skos:altLabel> - <skos:altLabel>tn</skos:altLabel> - <skos:altLabel>minimumtemperature</skos:altLabel> - <skos:prefLabel>Minimum temperature</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Climate"/> - <rdfs:subClassOf> - <oboe:Observation rdf:about="http://csopralibs.org#Temperature"> - <oboe:ofEntity rdf:resource="http://csopralibs.org#Temperature"/> - <skos:prefLabel>Temperature</skos:prefLabel> - <oboe:hasMeasurement> - <oboe:Measurement rdf:about="http://csopralibs.org#TempMeas"> - <skos:prefLabel>TempMeas</skos:prefLabel> - <oboe:usesStandard> - <owl:Class rdf:about="http://csopralibs.org#DegreeCelcius"/> - </oboe:usesStandard> - <skos:altLabel>tempmeas</skos:altLabel> - <skos:altLabel>TempMeas</skos:altLabel> - <rdfs:label>TempMeas</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </oboe:Measurement> - </oboe:hasMeasurement> - <skos:altLabel>temperature</skos:altLabel> - <skos:altLabel>Temperature</skos:altLabel> - <rdfs:label>Temperature</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </oboe:Observation> - </rdfs:subClassOf> - <skos:altLabel>MinimumTemperature</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#BrassicaOleraceaVar.Sabauda"> - <skos:altLabel>brassicaoleraceavar.sabauda</skos:altLabel> - <skos:altLabel>Brassica oleracea var. sabauda</skos:altLabel> - <skos:altLabel>cabbage</skos:altLabel> - <skos:prefLabel>Brassica oleracea var. sabauda</skos:prefLabel> - <skos:altLabel>brassica oleracea var. sabauda</skos:altLabel> - <rdfs:label>BrassicaOleraceaVar.Sabauda</rdfs:label> - <skos:altLabel>BrassicaOleraceaVar.Sabauda</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>savoy cabbage</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#ReduceTillage"> - <skos:altLabel>reduce tillage</skos:altLabel> - <skos:altLabel>Reduce tillage</skos:altLabel> - <skos:prefLabel>Reduce tillage</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#SoilTillage"/> - <skos:altLabel>reducetillage</skos:altLabel> - <skos:altLabel>ReduceTillage</skos:altLabel> - <rdfs:label>ReduceTillage</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Others"> - <skos:prefLabel>Others</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#OtherOrganicProducts"/> - </rdfs:subClassOf> - <skos:altLabel>others</skos:altLabel> - <skos:altLabel>Others</skos:altLabel> - <rdfs:label>Others</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#Sorghum"> - <skos:prefLabel>Sorghum</skos:prefLabel> - <skos:altLabel>Sorgho Grain(es)</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>hemisorghum</skos:altLabel> - <skos:altLabel>sorgho grain(es)</skos:altLabel> - <skos:altLabel>sorgum</skos:altLabel> - <rdfs:label>Sorghum</rdfs:label> - <skos:altLabel>sorghum</skos:altLabel> - <skos:altLabel>Sorghum</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SolidPhaseOfDigestateOfCoverCropsAndOtherWastes"> - <skos:altLabel>solid phase of digestate of cover crops and other wastes</skos:altLabel> - <skos:altLabel>Solid phase of digestate of cover crops and other wastes</skos:altLabel> - <skos:prefLabel>Solid phase of digestate of cover crops and other wastes</skos:prefLabel> - <skos:altLabel>solidphaseofdigestateofcovercropsandotherwastes</skos:altLabel> - <skos:altLabel>SolidPhaseOfDigestateOfCoverCropsAndOtherWastes</skos:altLabel> - <rdfs:label>SolidPhaseOfDigestateOfCoverCropsAndOtherWastes</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#PaperMillSludge"> - <skos:altLabel>paper mill sludge</skos:altLabel> - <skos:altLabel>Paper mill sludge</skos:altLabel> - <skos:prefLabel>Paper mill sludge</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Sludge"/> - <skos:altLabel>papermillsludge</skos:altLabel> - <skos:altLabel>PaperMillSludge</skos:altLabel> - <rdfs:label>PaperMillSludge</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#TrifoliumHybridum"> - <skos:altLabel>swedish clover</skos:altLabel> - <skos:altLabel>trifolium hybridum</skos:altLabel> - <skos:altLabel>Trifolium hybridum</skos:altLabel> - <skos:prefLabel>Trifolium hybridum</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>trifoliumhybridum</skos:altLabel> - <skos:altLabel>TrifoliumHybridum</skos:altLabel> - <rdfs:label>TrifoliumHybridum</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#FestucaPratensis"> - <skos:altLabel>meadow fescue</skos:altLabel> - <skos:altLabel>festuca pratensis</skos:altLabel> - <skos:altLabel>Festuca pratensis</skos:altLabel> - <skos:prefLabel>Festuca pratensis</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>festucapratensis</skos:altLabel> - <skos:altLabel>FestucaPratensis</skos:altLabel> - <rdfs:label>FestucaPratensis</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#RaphanusSativusVar.Oleiformis"> - <skos:altLabel>Raphanus sativus var. oleiformis</skos:altLabel> - <skos:altLabel>RaphanusSativusVar.Oleiformis</skos:altLabel> - <skos:altLabel>oilradish</skos:altLabel> - <skos:altLabel>oil radish</skos:altLabel> - <skos:altLabel>raphanussativusvar.oleiformis</skos:altLabel> - <skos:altLabel>radis fourrager / fourrage</skos:altLabel> - <skos:prefLabel>Raphanus sativus var. oleiformis</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <rdfs:label>RaphanusSativusVar.Oleiformis</rdfs:label> - <skos:altLabel>raphanus sativus var. oleiformis</skos:altLabel> - <skos:altLabel>Radis Fourrager / Fourrage</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SolidPhaseOfPigSlurry"> - <skos:altLabel>solid phase of pig slurry</skos:altLabel> - <skos:altLabel>Solid phase of pig slurry</skos:altLabel> - <skos:prefLabel>Solid phase of pig slurry</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#AnimalManure"/> - </rdfs:subClassOf> - <skos:altLabel>solidphaseofpigslurry</skos:altLabel> - <skos:altLabel>SolidPhaseOfPigSlurry</skos:altLabel> - <rdfs:label>SolidPhaseOfPigSlurry</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#AvenaStrigosa"> - <skos:altLabel>avena strigosa</skos:altLabel> - <skos:altLabel>avoine noir(e)</skos:altLabel> - <skos:altLabel>Avena strigosa</skos:altLabel> - <skos:prefLabel>Avena strigosa</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>Avoine Noir(e)</skos:altLabel> - <skos:altLabel>AvenaStrigosa</skos:altLabel> - <skos:altLabel>avenastrigosa</skos:altLabel> - <skos:altLabel>black oat</skos:altLabel> - <rdfs:label>AvenaStrigosa</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SimulatedSite"> - <skos:altLabel>Simulated Site</skos:altLabel> - <oboe:hasMeasurement> - <oboe:Measurement rdf:about="http://csopralibs.org#IDInSourceDB"> - <skos:altLabel>id_profil_aial</skos:altLabel> - <skos:altLabel>id in source db</skos:altLabel> - <skos:altLabel>ID in source DB</skos:altLabel> - <skos:prefLabel>ID in source DB</skos:prefLabel> - <skos:altLabel>idinsourcedb</skos:altLabel> - <skos:altLabel>IDInSourceDB</skos:altLabel> - <rdfs:label>IDInSourceDB</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </oboe:Measurement> - </oboe:hasMeasurement> - <oboe:hasMeasurement> - <oboe:Measurement rdf:about="http://csopralibs.org#StartYear"> - <skos:altLabel>year</skos:altLabel> - <skos:altLabel>YEAR</skos:altLabel> - <skos:prefLabel>StartYear</skos:prefLabel> - <oboe:usesStandard rdf:resource="http://csopralibs.org#Year"/> - <skos:altLabel>startyear</skos:altLabel> - <skos:altLabel>StartYear</skos:altLabel> - <rdfs:label>StartYear</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </oboe:Measurement> - </oboe:hasMeasurement> - <skos:altLabel>SimulatedSite</skos:altLabel> - <skos:altLabel>simulatedsite</skos:altLabel> - <oboe:ofEntity rdf:resource="http://csopralibs.org#SimulatedSite"/> - <oboe:hasContext rdf:resource="http://csopralibs.org#SoilOrganicCarbonStock"/> - <skos:prefLabel>Simulated Site</skos:prefLabel> - <rdfs:label>SimulatedSite</rdfs:label> - <oboe:hasMeasurement rdf:resource="http://csopralibs.org#Id"/> - <skos:altLabel>simulated site</skos:altLabel> - <rdf:type rdf:resource="http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#Observation"/> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#PotentialEvapotranspiration"> - <skos:altLabel>PET</skos:altLabel> - <skos:altLabel>Potential Evapotranspiration</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Climate"/> - <skos:prefLabel>Potential Evapotranspiration</skos:prefLabel> - <skos:altLabel>potentialevapotranspiration</skos:altLabel> - <rdfs:label>PotentialEvapotranspiration</rdfs:label> - <oboe:Measurement> - <oboe:Measurement rdf:about="http://csopralibs.org#PETMeas"> - <rdfs:comment>Potential Evapotranspiration in mm per month -</rdfs:comment> - <skos:prefLabel>PETMeas</skos:prefLabel> - <oboe:usesStandard> - <owl:Class rdf:about="http://csopralibs.org#MillimeterPerMonth"/> - </oboe:usesStandard> - <skos:altLabel>petmeas</skos:altLabel> - <skos:altLabel>PETMeas</skos:altLabel> - <rdfs:label>PETMeas</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </oboe:Measurement> - </oboe:Measurement> - <skos:altLabel>potential evapotranspiration</skos:altLabel> - <skos:altLabel>pet</skos:altLabel> - <skos:altLabel>PotentialEvapotranspiration</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#LoliumPerenne"> - <skos:altLabel>perennial ryegrass</skos:altLabel> - <skos:altLabel>lolium perenne</skos:altLabel> - <skos:altLabel>Lolium perenne</skos:altLabel> - <skos:prefLabel>Lolium perenne</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>loliumperenne</skos:altLabel> - <skos:altLabel>LoliumPerenne</skos:altLabel> - <rdfs:label>LoliumPerenne</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#KilogramPerSquaredMeterPerYear"> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#Units"/> - </rdfs:subClassOf> - <skos:altLabel>kilogram/m2/yr</skos:altLabel> - <skos:prefLabel>KilogramPerSquaredMeterPerYear</skos:prefLabel> - <csopra:hasConversion> - <csopra:Conversion rdf:about="http://csopralibs.org#KgPerM2PerYrToMgPerHaPerYrConversion"> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#Units"/> - </rdfs:subClassOf> - <csopra:conversionFactor rdf:datatype="http://www.w3.org/2001/XMLSchema#double" - >0.001</csopra:conversionFactor> - <csopra:conversionTo> - <owl:Class rdf:about="http://csopralibs.org#MegagramPerHectarePerYear"/> - </csopra:conversionTo> - <skos:prefLabel>KgPerM2PerYrToMgPerHaPerYrConversion</skos:prefLabel> - <skos:altLabel>kgperm2peryrtomgperhaperyrconversion</skos:altLabel> - <skos:altLabel>KgPerM2PerYrToMgPerHaPerYrConversion</skos:altLabel> - <rdfs:label>KgPerM2PerYrToMgPerHaPerYrConversion</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </csopra:Conversion> - </csopra:hasConversion> - <skos:altLabel>kilogrampersquaredmeterperyear</skos:altLabel> - <skos:altLabel>KilogramPerSquaredMeterPerYear</skos:altLabel> - <rdfs:label>KilogramPerSquaredMeterPerYear</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#GreenWasteCompost"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>greenwastecompost</skos:altLabel> - <skos:altLabel>omr_feucherolles</skos:altLabel> - <skos:altLabel>OMR_Feucherolles</skos:altLabel> - <rdfs:label>GreenWasteCompost</rdfs:label> - <skos:altLabel>Green waste compost</skos:altLabel> - <skos:altLabel>green waste compost</skos:altLabel> - <skos:prefLabel>Green waste compost</skos:prefLabel> - <skos:altLabel>GreenWasteCompost</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#MillimeterPerMonth"> - <skos:altLabel>mm/month</skos:altLabel> - <skos:prefLabel>MillimeterPerMonth</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#Units"/> - </rdfs:subClassOf> - <skos:altLabel>millimeterpermonth</skos:altLabel> - <skos:altLabel>MillimeterPerMonth</skos:altLabel> - <rdfs:label>MillimeterPerMonth</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#KilogramPerHectare"> - <owl:sameAs>http://ecoinformatics.org/oboe/oboe.1.0/oboe.owl#kilogramPerHectarePerYear</owl:sameAs> - <skos:prefLabel>KilogramPerHectare</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#Units"/> - </rdfs:subClassOf> - <skos:altLabel>kilogramperhectare</skos:altLabel> - <skos:altLabel>KilogramPerHectare</skos:altLabel> - <rdfs:label>KilogramPerHectare</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#BovineSlurry"> - <skos:altLabel>bovine slurry</skos:altLabel> - <skos:altLabel>Bovine slurry</skos:altLabel> - <skos:prefLabel>Bovine slurry</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#AnimalManure"/> - </rdfs:subClassOf> - <skos:altLabel>bovineslurry</skos:altLabel> - <skos:altLabel>BovineSlurry</skos:altLabel> - <rdfs:label>BovineSlurry</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#MunicipalSolidWasteCompost"> - <skos:altLabel>municipal solid waste compost</skos:altLabel> - <skos:altLabel>Municipal solid waste compost</skos:altLabel> - <skos:prefLabel>Municipal solid waste compost</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>municipalsolidwastecompost</skos:altLabel> - <skos:altLabel>MunicipalSolidWasteCompost</skos:altLabel> - <rdfs:label>MunicipalSolidWasteCompost</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Digestate"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#CarbonInputFromOrganicFertilization"/> - <skos:prefLabel>Digestate</skos:prefLabel> - <skos:altLabel>digestate</skos:altLabel> - <skos:altLabel>Digestate</skos:altLabel> - <rdfs:label>Digestate</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#OtherOrganicProducts"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#CarbonInputFromOrganicFertilization"/> - <skos:altLabel>other organic products</skos:altLabel> - <skos:altLabel>Other organic products</skos:altLabel> - <skos:prefLabel>Other organic products</skos:prefLabel> - <skos:altLabel>otherorganicproducts</skos:altLabel> - <skos:altLabel>OtherOrganicProducts</skos:altLabel> - <rdfs:label>OtherOrganicProducts</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#WinterTriticale"> - <skos:altLabel>winter triticale</skos:altLabel> - <skos:altLabel>Winter triticale</skos:altLabel> - <skos:prefLabel>Winter triticale</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>wintertriticale</skos:altLabel> - <skos:altLabel>WinterTriticale</skos:altLabel> - <rdfs:label>WinterTriticale</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#WinterWheat"> - <skos:altLabel>Blé tendre Printemps</skos:altLabel> - <skos:altLabel>soft wheat</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>WinterWheat</skos:altLabel> - <skos:altLabel>blé tendre printemps</skos:altLabel> - <skos:altLabel>winterwheat</skos:altLabel> - <skos:altLabel>Winter wheat</skos:altLabel> - <rdfs:label>WinterWheat</rdfs:label> - <skos:altLabel>winter wheat</skos:altLabel> - <skos:altLabel>blé tendre hiver</skos:altLabel> - <skos:prefLabel>Winter wheat</skos:prefLabel> - <skos:altLabel>wheat</skos:altLabel> - <skos:altLabel>Blé tendre Hiver</skos:altLabel> - <skos:altLabel>blé tendre</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#MegagramPerHectarePerYear"> - <skos:altLabel>megagram/ha/yr</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#Units"/> - </rdfs:subClassOf> - <skos:prefLabel>MegagramPerHectarePerYear</skos:prefLabel> - <skos:altLabel>megagramperhectareperyear</skos:altLabel> - <skos:altLabel>MegagramPerHectarePerYear</skos:altLabel> - <rdfs:label>MegagramPerHectarePerYear</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#GreenWasteAndChickenDroppingsCompost"> - <skos:altLabel>green waste and chicken droppings compost</skos:altLabel> - <skos:altLabel>Green waste and chicken droppings compost</skos:altLabel> - <skos:prefLabel>Green waste and chicken droppings compost</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>greenwasteandchickendroppingscompost</skos:altLabel> - <skos:altLabel>GreenWasteAndChickenDroppingsCompost</skos:altLabel> - <rdfs:label>GreenWasteAndChickenDroppingsCompost</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Degree"> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#Units"/> - </rdfs:subClassOf> - <skos:prefLabel>Degree</skos:prefLabel> - <skos:altLabel>degree</skos:altLabel> - <skos:altLabel>Degree</skos:altLabel> - <rdfs:label>Degree</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#AnimalManure"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#CarbonInputFromOrganicFertilization"/> - <skos:altLabel>animal manure</skos:altLabel> - <skos:altLabel>Animal manure</skos:altLabel> - <skos:prefLabel>Animal manure</skos:prefLabel> - <skos:altLabel>animalmanure</skos:altLabel> - <skos:altLabel>AnimalManure</skos:altLabel> - <rdfs:label>AnimalManure</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#gravel"> - <skos:altLabel>cf</skos:altLabel> - <rdfs:label>gravel</rdfs:label> - <rdfs:comment>Proportion of coarse fragments. Unit: %. -</rdfs:comment> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#FileInputs"/> - <skos:altLabel>CF</skos:altLabel> - <skos:altLabel>coarse fraction</skos:altLabel> - <skos:prefLabel>gravel</skos:prefLabel> - <skos:altLabel>coarse</skos:altLabel> - <skos:altLabel>coarse elements</skos:altLabel> - <skos:altLabel>gravel</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#PisumSativum"> - <skos:prefLabel>Pisum sativum</skos:prefLabel> - <skos:altLabel>pea</skos:altLabel> - <skos:altLabel>Pois Protéagineux</skos:altLabel> - <skos:altLabel>pisum sativum</skos:altLabel> - <skos:altLabel>PisumSativum</skos:altLabel> - <skos:altLabel>pisum</skos:altLabel> - <skos:altLabel>pisumsativum</skos:altLabel> - <skos:altLabel>pois protéagineux</skos:altLabel> - <skos:altLabel>fodder pea frostresistent</skos:altLabel> - <rdfs:label>PisumSativum</rdfs:label> - <skos:altLabel>Pisum sativum</skos:altLabel> - <skos:altLabel>fodder pea</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#RawDigestateOfMunicipalSolidWaste"> - <skos:altLabel>raw digestate of municipal solid waste</skos:altLabel> - <skos:altLabel>Raw digestate of municipal solid waste</skos:altLabel> - <skos:prefLabel>Raw digestate of municipal solid waste</skos:prefLabel> - <skos:altLabel>rawdigestateofmunicipalsolidwaste</skos:altLabel> - <skos:altLabel>RawDigestateOfMunicipalSolidWaste</skos:altLabel> - <rdfs:label>RawDigestateOfMunicipalSolidWaste</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#PhaseolusVulgaris"> - <skos:altLabel>bean</skos:altLabel> - <skos:altLabel>Phaseolus vulgaris</skos:altLabel> - <skos:altLabel>phaseolus vulgaris</skos:altLabel> - <skos:altLabel>PhaseolusVulgaris</skos:altLabel> - <skos:prefLabel>Phaseolus vulgaris</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>common bean</skos:altLabel> - <skos:altLabel>phaseolusvulgaris</skos:altLabel> - <rdfs:label>PhaseolusVulgaris</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CompostedChickenManure"> - <skos:altLabel>compost de fumier de volailles</skos:altLabel> - <skos:altLabel>composted chicken manure</skos:altLabel> - <skos:altLabel>Composted chicken manure</skos:altLabel> - <skos:prefLabel>Composted chicken manure</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>compostedchickenmanure</skos:altLabel> - <skos:altLabel>CompostedChickenManure</skos:altLabel> - <rdfs:label>CompostedChickenManure</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#BrassicaNigra"> - <skos:altLabel>black mustard</skos:altLabel> - <skos:altLabel>brassica nigra</skos:altLabel> - <skos:altLabel>Brassica nigra</skos:altLabel> - <skos:prefLabel>Brassica nigra</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>brassicanigra</skos:altLabel> - <skos:altLabel>BrassicaNigra</skos:altLabel> - <rdfs:label>BrassicaNigra</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#GreenWasteAndSludgeCompost"> - <skos:altLabel>green waste and sludge compost</skos:altLabel> - <skos:altLabel>Green waste and sludge compost</skos:altLabel> - <skos:prefLabel>Green waste and sludge compost</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>greenwasteandsludgecompost</skos:altLabel> - <skos:altLabel>GreenWasteAndSludgeCompost</skos:altLabel> - <rdfs:label>GreenWasteAndSludgeCompost</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#AbovegroundCarbonInput"> - <skos:altLabel>aboveground carbon input</skos:altLabel> - <skos:altLabel>Aboveground Carbon Input</skos:altLabel> - <skos:prefLabel>Aboveground Carbon Input</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#CarbonInputObs"/> - </rdfs:subClassOf> - <skos:altLabel>abovegroundcarboninput</skos:altLabel> - <skos:altLabel>AbovegroundCarbonInput</skos:altLabel> - <rdfs:label>AbovegroundCarbonInput</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#volumeOfIrrigationWater"> - <skos:altLabel>irrig</skos:altLabel> - <skos:altLabel>volumeOfIrrigationWater</skos:altLabel> - <rdfs:label>volumeOfIrrigationWater</rdfs:label> - <rdfs:comment>Irrigation amount. Unit: mm/yr. -</rdfs:comment> - <skos:altLabel>volumeofirrigationwater</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#FileInputs"/> - <skos:altLabel>volume of irrigation water</skos:altLabel> - <skos:prefLabel>volume of irrigation water</skos:prefLabel> - <skos:altLabel>Irrig</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#ChickenManure"> - <skos:altLabel>fumier de volailles</skos:altLabel> - <skos:altLabel>chicken manure</skos:altLabel> - <skos:altLabel>Chicken manure</skos:altLabel> - <skos:prefLabel>Chicken manure</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#AnimalManure"/> - <skos:altLabel>chickenmanure</skos:altLabel> - <skos:altLabel>ChickenManure</skos:altLabel> - <rdfs:label>ChickenManure</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SolidPhaseOfDigestateOfBiowasteAndOtherWastes"> - <skos:altLabel>solid phase of digestate of biowaste and other wastes</skos:altLabel> - <skos:altLabel>Solid phase of digestate of biowaste and other wastes</skos:altLabel> - <skos:prefLabel>Solid phase of digestate of biowaste and other wastes</skos:prefLabel> - <skos:altLabel>solidphaseofdigestateofbiowasteandotherwastes</skos:altLabel> - <skos:altLabel>SolidPhaseOfDigestateOfBiowasteAndOtherWastes</skos:altLabel> - <rdfs:label>SolidPhaseOfDigestateOfBiowasteAndOtherWastes</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Molasse"> - <skos:prefLabel>Molasse</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#OtherOrganicProducts"/> - <skos:altLabel>molasse</skos:altLabel> - <skos:altLabel>Molasse</skos:altLabel> - <rdfs:label>Molasse</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#ApiumGraveolens"> - <skos:altLabel>celery</skos:altLabel> - <skos:altLabel>apium graveolens</skos:altLabel> - <skos:altLabel>Apium graveolens</skos:altLabel> - <skos:prefLabel>Apium graveolens</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>apiumgraveolens</skos:altLabel> - <skos:altLabel>ApiumGraveolens</skos:altLabel> - <rdfs:label>ApiumGraveolens</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#HorseManure"> - <skos:altLabel>horse manure</skos:altLabel> - <skos:altLabel>Horse manure</skos:altLabel> - <skos:prefLabel>Horse manure</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#AnimalManure"/> - <skos:altLabel>horsemanure</skos:altLabel> - <skos:altLabel>HorseManure</skos:altLabel> - <rdfs:label>HorseManure</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#OtherCompost"> - <skos:altLabel>other compost</skos:altLabel> - <skos:altLabel>Other Compost</skos:altLabel> - <skos:prefLabel>Other Compost</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>othercompost</skos:altLabel> - <skos:altLabel>OtherCompost</skos:altLabel> - <rdfs:label>OtherCompost</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#PhaceliaTanacetifolia"> - <skos:altLabel>phacelia</skos:altLabel> - <skos:altLabel>phacelia tanacetifolia</skos:altLabel> - <skos:altLabel>Phacelia tanacetifolia</skos:altLabel> - <skos:prefLabel>Phacelia tanacetifolia</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>phaceliatanacetifolia</skos:altLabel> - <skos:altLabel>PhaceliaTanacetifolia</skos:altLabel> - <rdfs:label>PhaceliaTanacetifolia</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#PigManure"> - <skos:prefLabel>Pig manure</skos:prefLabel> - <skos:altLabel>PigManure</skos:altLabel> - <skos:altLabel>pig manure</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#AnimalManure"/> - <skos:altLabel>pigmanure</skos:altLabel> - <skos:altLabel>fumier de porcs</skos:altLabel> - <skos:altLabel>Pig manure</skos:altLabel> - <rdfs:label>PigManure</rdfs:label> - <skos:altLabel>fumier de porc</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#BrassicaNapusSubsp.Napus"> - <skos:altLabel>colza h</skos:altLabel> - <skos:altLabel>summer oil seed rape</skos:altLabel> - <skos:altLabel>summer rapeseed</skos:altLabel> - <skos:altLabel>Colza Hiver</skos:altLabel> - <skos:altLabel>oilseed rape</skos:altLabel> - <skos:altLabel>Colza H</skos:altLabel> - <skos:altLabel>winter rapeseed</skos:altLabel> - <skos:altLabel>BrassicaNapusSubsp.Napus</skos:altLabel> - <skos:prefLabel>Brassica napus subsp. napus</skos:prefLabel> - <skos:altLabel>winter oil seed rape</skos:altLabel> - <skos:altLabel>rapeseed</skos:altLabel> - <skos:altLabel>brassicanapussubsp.napus</skos:altLabel> - <skos:altLabel>winter oilseed winter rape</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>oil seed rape</skos:altLabel> - <skos:altLabel>Brassica napus subsp. napus</skos:altLabel> - <skos:altLabel>colza hiver</skos:altLabel> - <skos:altLabel>summer oilseed rape</skos:altLabel> - <skos:altLabel>brassica napus subsp. napus</skos:altLabel> - <rdfs:label>BrassicaNapusSubsp.Napus</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#MegagramPerHectare"> - <skos:altLabel>T/ha</skos:altLabel> - <skos:altLabel>t/ha</skos:altLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#Units"/> - </rdfs:subClassOf> - <skos:prefLabel>MegagramPerHectare</skos:prefLabel> - <skos:altLabel>megagramperhectare</skos:altLabel> - <skos:altLabel>MegagramPerHectare</skos:altLabel> - <rdfs:label>MegagramPerHectare</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#UrbanSewageSludge"> - <skos:altLabel>urban sewage sludge</skos:altLabel> - <skos:altLabel>Urban sewage sludge</skos:altLabel> - <skos:prefLabel>Urban sewage sludge</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Sludge"/> - <skos:altLabel>urbansewagesludge</skos:altLabel> - <skos:altLabel>UrbanSewageSludge</skos:altLabel> - <rdfs:label>UrbanSewageSludge</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Vetch-ryeMixture"> - <skos:altLabel>vetch-rye mixture</skos:altLabel> - <skos:altLabel>Vetch-rye mixture</skos:altLabel> - <skos:prefLabel>Vetch-rye mixture</skos:prefLabel> - <rdfs:subClassOf> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"/> - </rdfs:subClassOf> - <skos:altLabel>vetch-ryemixture</skos:altLabel> - <skos:altLabel>Vetch-ryeMixture</skos:altLabel> - <rdfs:label>Vetch-ryeMixture</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#PlantSpecies"> - <skos:altLabel>plant species</skos:altLabel> - <skos:altLabel>nom_culture</skos:altLabel> - <skos:altLabel>CROP</skos:altLabel> - <rdfs:comment>Name of the crop cultivated on a specific simulation unit and a specific year. -</rdfs:comment> - <skos:altLabel>PlantSpecies</skos:altLabel> - <skos:altLabel>crop</skos:altLabel> - <rdfs:label>PlantSpecies</rdfs:label> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#FileInputs"/> - <skos:altLabel>plantspecies</skos:altLabel> - <skos:altLabel>Plant species</skos:altLabel> - <skos:altLabel>plant_name</skos:altLabel> - <skos:prefLabel>Plant species</skos:prefLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#LoliumMultiflorum"> - <skos:altLabel>Ray-grass d'Italie</skos:altLabel> - <skos:altLabel>italian ryegrass</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>Lolium multiflorum</skos:altLabel> - <skos:altLabel>annual ryegrass</skos:altLabel> - <skos:altLabel>ray-grass d'italie</skos:altLabel> - <skos:altLabel>loliummultiflorum</skos:altLabel> - <skos:prefLabel>Lolium multiflorum</skos:prefLabel> - <rdfs:label>LoliumMultiflorum</rdfs:label> - <skos:altLabel>lolium multiflorum</skos:altLabel> - <skos:altLabel>LoliumMultiflorum</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#DegreeCelcius"> - <skos:prefLabel>DegreeCelcius</skos:prefLabel> - <skos:altLabel>degreecelcius</skos:altLabel> - <skos:altLabel>DegreeCelcius</skos:altLabel> - <rdfs:label>DegreeCelcius</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#EOM_C"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#FileInputs"/> - <rdfs:comment>Amount of carbon brought by organic fertilization. Unit: tC/ha/yr. -</rdfs:comment> - <skos:prefLabel>EOM_C</skos:prefLabel> - <skos:altLabel>eom_c</skos:altLabel> - <skos:altLabel>EOM_C</skos:altLabel> - <rdfs:label>EOM_C</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#ViciaFaba"> - <skos:prefLabel>Vicia faba</skos:prefLabel> - <skos:altLabel>viciafaba</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>fèverole</skos:altLabel> - <skos:altLabel>vicia faba</skos:altLabel> - <skos:altLabel>faba bean</skos:altLabel> - <skos:altLabel>ViciaFaba</skos:altLabel> - <skos:altLabel>fava bean</skos:altLabel> - <rdfs:label>ViciaFaba</rdfs:label> - <skos:altLabel>broad bean</skos:altLabel> - <skos:altLabel>Fèverole</skos:altLabel> - <skos:altLabel>Vicia faba</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CompostedPigSlurryAndVegetalResidues"> - <skos:altLabel>composted pig slurry and vegetal residues</skos:altLabel> - <skos:altLabel>Composted pig slurry and vegetal residues</skos:altLabel> - <skos:prefLabel>Composted pig slurry and vegetal residues</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>compostedpigslurryandvegetalresidues</skos:altLabel> - <skos:altLabel>CompostedPigSlurryAndVegetalResidues</skos:altLabel> - <rdfs:label>CompostedPigSlurryAndVegetalResidues</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#BrassicaRapaSubsp.Rapa"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>BrassicaRapaSubsp.Rapa</skos:altLabel> - <skos:prefLabel>Brassica rapa subsp. rapa</skos:prefLabel> - <skos:altLabel>brassicarapasubsp.rapa</skos:altLabel> - <skos:altLabel>autumn turnip</skos:altLabel> - <skos:altLabel>rutabaga</skos:altLabel> - <skos:altLabel>Brassica rapa subsp. rapa</skos:altLabel> - <skos:altLabel>brassica rapa subsp. rapa</skos:altLabel> - <skos:altLabel>rutabagas</skos:altLabel> - <skos:altLabel>Rutabaga</skos:altLabel> - <rdfs:label>BrassicaRapaSubsp.Rapa</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#GreenRye"> - <skos:altLabel>green rye</skos:altLabel> - <skos:altLabel>Green rye</skos:altLabel> - <skos:prefLabel>Green rye</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>greenrye</skos:altLabel> - <skos:altLabel>GreenRye</skos:altLabel> - <rdfs:label>GreenRye</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Bark"> - <skos:prefLabel>Bark</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#VegetalResidue"/> - <skos:altLabel>bark</skos:altLabel> - <skos:altLabel>Bark</skos:altLabel> - <rdfs:label>Bark</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Guano"> - <skos:prefLabel>Guano</skos:prefLabel> - <skos:altLabel>guano</skos:altLabel> - <skos:altLabel>Guano</skos:altLabel> - <rdfs:label>Guano</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#MeadowEcosystem"> - <skos:altLabel>hay</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:prefLabel>Meadow ecosystem</skos:prefLabel> - <rdfs:label>MeadowEcosystem</rdfs:label> - <skos:altLabel>meadow ecosystem</skos:altLabel> - <skos:altLabel>MeadowEcosystem</skos:altLabel> - <skos:altLabel>non-legume hay</skos:altLabel> - <skos:altLabel>meadowecosystem</skos:altLabel> - <skos:altLabel>Meadow ecosystem</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#PigSlurry"> - <skos:altLabel>lisier de porc</skos:altLabel> - <skos:altLabel>lisier de porc (m3/ha)</skos:altLabel> - <skos:altLabel>pigslurry</skos:altLabel> - <skos:altLabel>PigSlurry</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#AnimalManure"/> - <skos:altLabel>Lisier de Porc</skos:altLabel> - <skos:altLabel>Pig slurry</skos:altLabel> - <skos:prefLabel>Pig slurry</skos:prefLabel> - <rdfs:label>PigSlurry</rdfs:label> - <skos:altLabel>Lisier de Porc (m3/ha)</skos:altLabel> - <skos:altLabel>pig slurry</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#LiquidPhaseOfDigestateOfLivestockEffluentsAndOtherWastes"> - <skos:altLabel>liquid phase of digestate of livestock effluents and other wastes</skos:altLabel> - <skos:altLabel>Liquid phase of digestate of livestock effluents and other wastes</skos:altLabel> - <skos:prefLabel>Liquid phase of digestate of livestock effluents and other wastes</skos:prefLabel> - <skos:altLabel>liquidphaseofdigestateoflivestockeffluentsandotherwastes</skos:altLabel> - <skos:altLabel>LiquidPhaseOfDigestateOfLivestockEffluentsAndOtherWastes</skos:altLabel> - <rdfs:label>LiquidPhaseOfDigestateOfLivestockEffluentsAndOtherWastes</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#silt"> - <rdfs:comment>Amount of silt. Unit: %. -</rdfs:comment> - <skos:altLabel>SILT</skos:altLabel> - <skos:prefLabel>silt</skos:prefLabel> - <skos:altLabel>silt</skos:altLabel> - <rdfs:label>silt</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#ChickenDroppings"> - <skos:altLabel>chicken droppings</skos:altLabel> - <skos:altLabel>Chicken droppings</skos:altLabel> - <skos:prefLabel>Chicken droppings</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#AnimalManure"/> - <skos:altLabel>chickendroppings</skos:altLabel> - <skos:altLabel>ChickenDroppings</skos:altLabel> - <rdfs:label>ChickenDroppings</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#CannabisSativa"> - <skos:altLabel>hemp</skos:altLabel> - <skos:altLabel>cannabis sativa</skos:altLabel> - <skos:altLabel>Cannabis sativa</skos:altLabel> - <skos:prefLabel>Cannabis sativa</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>cannabissativa</skos:altLabel> - <skos:altLabel>CannabisSativa</skos:altLabel> - <rdfs:label>CannabisSativa</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CompostedGoatManure"> - <skos:altLabel>composted goat manure</skos:altLabel> - <skos:altLabel>Composted goat manure</skos:altLabel> - <skos:prefLabel>Composted goat manure</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>compostedgoatmanure</skos:altLabel> - <skos:altLabel>CompostedGoatManure</skos:altLabel> - <rdfs:label>CompostedGoatManure</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Units"> - <skos:prefLabel>Units</skos:prefLabel> - <skos:altLabel>units</skos:altLabel> - <skos:altLabel>Units</skos:altLabel> - <rdfs:label>Units</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Min"> - <skos:prefLabel>Min</skos:prefLabel> - <skos:altLabel>min</skos:altLabel> - <skos:altLabel>Min</skos:altLabel> - <rdfs:label>Min</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#AvenaSativa"> - <skos:prefLabel>Avena sativa</skos:prefLabel> - <skos:altLabel>summer oat</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>avenasativa</skos:altLabel> - <skos:altLabel>oat</skos:altLabel> - <skos:altLabel>avena sativa</skos:altLabel> - <skos:altLabel>AvenaSativa</skos:altLabel> - <skos:altLabel>winter oat</skos:altLabel> - <skos:altLabel>Avena sativa</skos:altLabel> - <rdfs:label>AvenaSativa</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Meter"> - <skos:altLabel>m</skos:altLabel> - <skos:prefLabel>Meter</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Units"/> - <skos:altLabel>meter</skos:altLabel> - <skos:altLabel>Meter</skos:altLabel> - <rdfs:label>Meter</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#AsparagusOfficinalis"> - <rdfs:label>AsparagusOfficinalis</rdfs:label> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>AsparagusOfficinalis</skos:altLabel> - <skos:altLabel>garden asparagus</skos:altLabel> - <skos:altLabel>Asparagus officinalis</skos:altLabel> - <skos:altLabel>asparagusofficinalis</skos:altLabel> - <skos:altLabel>asparagus</skos:altLabel> - <skos:altLabel>asparagus officinalis</skos:altLabel> - <skos:prefLabel>Asparagus officinalis</skos:prefLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#SpiceOrFlavor-producingPlant"> - <skos:altLabel>herbs</skos:altLabel> - <skos:altLabel>spice or flavor-producing plant</skos:altLabel> - <skos:altLabel>Spice or flavor-producing plant</skos:altLabel> - <skos:prefLabel>Spice or flavor-producing plant</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>spiceorflavor-producingplant</skos:altLabel> - <skos:altLabel>SpiceOrFlavor-producingPlant</skos:altLabel> - <rdfs:label>SpiceOrFlavor-producingPlant</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#DriedUrbanSewageSludge"> - <skos:altLabel>dried urban sewage sludge</skos:altLabel> - <skos:altLabel>Dried urban sewage sludge</skos:altLabel> - <skos:prefLabel>Dried urban sewage sludge</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Sludge"/> - <skos:altLabel>driedurbansewagesludge</skos:altLabel> - <skos:altLabel>DriedUrbanSewageSludge</skos:altLabel> - <rdfs:label>DriedUrbanSewageSludge</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#GrainCorn"> - <skos:altLabel>grain maize</skos:altLabel> - <skos:prefLabel>Grain corn</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>GrainCorn</skos:altLabel> - <skos:altLabel>graincorn</skos:altLabel> - <skos:altLabel>maïs grain(es)</skos:altLabel> - <skos:altLabel>grain corn</skos:altLabel> - <skos:altLabel>Grain corn</skos:altLabel> - <rdfs:label>GrainCorn</rdfs:label> - <skos:altLabel>Maïs Grain(es)</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#Vicia"> - <skos:altLabel>vetch summer</skos:altLabel> - <skos:altLabel>vicia </skos:altLabel> - <skos:altLabel>vetch winter</skos:altLabel> - <skos:altLabel>Vicia</skos:altLabel> - <skos:altLabel>Vicia </skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <rdfs:label>Vicia</rdfs:label> - <skos:altLabel>vicia</skos:altLabel> - <skos:prefLabel>Vicia </skos:prefLabel> - <skos:altLabel>hairy vetch</skos:altLabel> - <skos:altLabel>vetch</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#DepthRelativeToSurface"> - <skos:prefLabel>DepthRelativeToSurface</skos:prefLabel> - <skos:altLabel>depthrelativetosurface</skos:altLabel> - <skos:altLabel>DepthRelativeToSurface</skos:altLabel> - <rdfs:label>DepthRelativeToSurface</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CompostedSheepManure"> - <skos:altLabel>composted sheep manure</skos:altLabel> - <skos:altLabel>Composted sheep manure</skos:altLabel> - <skos:prefLabel>Composted sheep manure</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>compostedsheepmanure</skos:altLabel> - <skos:altLabel>CompostedSheepManure</skos:altLabel> - <rdfs:label>CompostedSheepManure</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#FagopyrumEsculentum"> - <skos:altLabel>buckwheat</skos:altLabel> - <skos:altLabel>fagopyrum esculentum</skos:altLabel> - <skos:altLabel>Fagopyrum esculentum</skos:altLabel> - <skos:prefLabel>Fagopyrum esculentum</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>fagopyrumesculentum</skos:altLabel> - <skos:altLabel>FagopyrumEsculentum</skos:altLabel> - <rdfs:label>FagopyrumEsculentum</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#TrifoliumAlexandrinum"> - <skos:altLabel>alexandrian clover</skos:altLabel> - <skos:altLabel>trifolium alexandrinum</skos:altLabel> - <skos:altLabel>Trifolium alexandrinum</skos:altLabel> - <skos:prefLabel>Trifolium alexandrinum</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>trifoliumalexandrinum</skos:altLabel> - <skos:altLabel>TrifoliumAlexandrinum</skos:altLabel> - <rdfs:label>TrifoliumAlexandrinum</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#TreeFruit"> - <skos:altLabel>tree fruit</skos:altLabel> - <skos:altLabel>Tree fruit</skos:altLabel> - <skos:prefLabel>Tree fruit</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>treefruit</skos:altLabel> - <skos:altLabel>TreeFruit</skos:altLabel> - <rdfs:label>TreeFruit</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#GreenWasteAndBovineManureCompost"> - <skos:altLabel>green waste and bovine manure compost</skos:altLabel> - <skos:altLabel>Green waste and bovine manure compost</skos:altLabel> - <skos:prefLabel>Green waste and bovine manure compost</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>greenwasteandbovinemanurecompost</skos:altLabel> - <skos:altLabel>GreenWasteAndBovineManureCompost</skos:altLabel> - <rdfs:label>GreenWasteAndBovineManureCompost</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#OtherSludge"> - <skos:altLabel>boue</skos:altLabel> - <skos:prefLabel>Other sludge</skos:prefLabel> - <skos:altLabel>othersludge</skos:altLabel> - <skos:altLabel>other sludge</skos:altLabel> - <skos:altLabel>OtherSludge</skos:altLabel> - <skos:altLabel>Other sludge</skos:altLabel> - <rdfs:label>OtherSludge</rdfs:label> - <skos:altLabel>BOUE</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Sludge"/> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#MedicagoSativa"> - <skos:altLabel>luzerne</skos:altLabel> - <skos:altLabel>lucerne</skos:altLabel> - <skos:altLabel>MedicagoSativa</skos:altLabel> - <skos:altLabel>Luzerne</skos:altLabel> - <skos:altLabel>medicago sativa</skos:altLabel> - <skos:altLabel>alfalfa</skos:altLabel> - <rdfs:label>MedicagoSativa</rdfs:label> - <skos:prefLabel>Medicago sativa</skos:prefLabel> - <skos:altLabel>medicagosativa</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>Medicago sativa</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#SeedingDate"> - <rdfs:comment>Sowing date of the crop. Format: DD-MM. -</rdfs:comment> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#FileInputs"/> - <skos:altLabel>seedingdate</skos:altLabel> - <skos:altLabel>Seeding date</skos:altLabel> - <skos:altLabel>sowing_date</skos:altLabel> - <rdfs:label>SeedingDate</rdfs:label> - <skos:altLabel>seeding date</skos:altLabel> - <skos:prefLabel>Seeding date</skos:prefLabel> - <skos:altLabel>SOWING_DATE</skos:altLabel> - <skos:altLabel>SeedingDate</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SummerRye"> - <skos:altLabel>summer rye</skos:altLabel> - <skos:altLabel>Summer rye</skos:altLabel> - <skos:prefLabel>Summer rye</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>summerrye</skos:altLabel> - <skos:altLabel>SummerRye</skos:altLabel> - <rdfs:label>SummerRye</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Yield"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#FileInputs"/> - <rdfs:comment>Yield of the crop in term of dry matter. Unit: t/ha/yr -</rdfs:comment> - <skos:altLabel>rendement</skos:altLabel> - <skos:prefLabel>Yield</skos:prefLabel> - <skos:altLabel>yield</skos:altLabel> - <skos:altLabel>Yield</skos:altLabel> - <rdfs:label>Yield</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SolidPhaseOfDigestateOfLivestockEffluentsAndOtherWastes"> - <skos:altLabel>solid phase of digestate of livestock effluents and other wastes</skos:altLabel> - <skos:altLabel>Solid phase of digestate of livestock effluents and other wastes</skos:altLabel> - <skos:prefLabel>Solid phase of digestate of livestock effluents and other wastes</skos:prefLabel> - <skos:altLabel>solidphaseofdigestateoflivestockeffluentsandotherwastes</skos:altLabel> - <skos:altLabel>SolidPhaseOfDigestateOfLivestockEffluentsAndOtherWastes</skos:altLabel> - <rdfs:label>SolidPhaseOfDigestateOfLivestockEffluentsAndOtherWastes</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CompostedPigManure"> - <skos:altLabel>compost de fumier de porcs</skos:altLabel> - <skos:altLabel>composted pig manure</skos:altLabel> - <skos:altLabel>Composted pig manure</skos:altLabel> - <skos:prefLabel>Composted pig manure</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>compostedpigmanure</skos:altLabel> - <skos:altLabel>CompostedPigManure</skos:altLabel> - <rdfs:label>CompostedPigManure</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Centimeter"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Units"/> - <csopra:hasConversion> - <csopra:Conversion rdf:about="http://csopralibs.org#CentimeterToMeterConversion"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Units"/> - <csopra:conversionFactor rdf:datatype="http://www.w3.org/2001/XMLSchema#double" - >0.01</csopra:conversionFactor> - <csopra:conversionTo rdf:resource="http://csopralibs.org#Meter"/> - <skos:prefLabel>CentimeterToMeterConversion</skos:prefLabel> - <skos:altLabel>centimetertometerconversion</skos:altLabel> - <skos:altLabel>CentimeterToMeterConversion</skos:altLabel> - <rdfs:label>CentimeterToMeterConversion</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </csopra:Conversion> - </csopra:hasConversion> - <skos:altLabel>cm</skos:altLabel> - <skos:prefLabel>Centimeter</skos:prefLabel> - <csopra:hasConversion> - <csopra:Conversion rdf:about="http://csopralibs.org#CentimeterToMillimeterConversion"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Units"/> - <csopra:conversionFactor rdf:datatype="http://www.w3.org/2001/XMLSchema#double" - >10.0</csopra:conversionFactor> - <csopra:conversionTo rdf:resource="http://csopralibs.org#Millimeter"/> - <skos:prefLabel>CentimeterToMillimeterConversion</skos:prefLabel> - <skos:altLabel>centimetertomillimeterconversion</skos:altLabel> - <skos:altLabel>CentimeterToMillimeterConversion</skos:altLabel> - <rdfs:label>CentimeterToMillimeterConversion</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </csopra:Conversion> - </csopra:hasConversion> - <skos:altLabel>centimeter</skos:altLabel> - <skos:altLabel>Centimeter</skos:altLabel> - <rdfs:label>Centimeter</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#MaximumTemperature"> - <skos:altLabel>Maximum temperature</skos:altLabel> - <skos:altLabel>MaximumTemperature</skos:altLabel> - <skos:altLabel>TX</skos:altLabel> - <skos:altLabel>tx</skos:altLabel> - <skos:altLabel>maximumtemperature</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Temperature"/> - <rdfs:label>MaximumTemperature</rdfs:label> - <skos:prefLabel>Maximum temperature</skos:prefLabel> - <skos:altLabel>maximum temperature</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Climate"/> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CarbonInputObs"> - <skos:altLabel>carboninputobs</skos:altLabel> - <rdfs:label>CarbonInputObs</rdfs:label> - <oboe:ofEntity rdf:resource="http://csopralibs.org#Variable"/> - <rdfs:comment>Ceci est une note test -</rdfs:comment> - <rdf:type rdf:resource="http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#Observation"/> - <oboe:hasContext rdf:resource="http://csopralibs.org#SoilLayerObs"/> - <skos:prefLabel>CarbonInputObs</skos:prefLabel> - <oboe:hasMeasurement> - <oboe:Measurement rdf:about="http://csopralibs.org#CFluxMeas"> - <skos:altLabel>belowground carbon</skos:altLabel> - <skos:altLabel>aboveground carbon</skos:altLabel> - <skos:prefLabel>CFluxMeas</skos:prefLabel> - <oboe:usesStandard rdf:resource="http://csopralibs.org#MegagramPerHectarePerYear"/> - <skos:altLabel>cfluxmeas</skos:altLabel> - <skos:altLabel>CFluxMeas</skos:altLabel> - <rdfs:label>CFluxMeas</rdfs:label> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - </oboe:Measurement> - </oboe:hasMeasurement> - <skos:altLabel>CarbonInputObs</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#OrnithopusSativus"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:prefLabel>Ornithopus sativus</skos:prefLabel> - <skos:altLabel>seradella</skos:altLabel> - <skos:altLabel>serradella</skos:altLabel> - <rdfs:label>OrnithopusSativus</rdfs:label> - <skos:altLabel>ornithopussativus</skos:altLabel> - <skos:altLabel>OrnithopusSativus</skos:altLabel> - <skos:altLabel>ornithopus sativus</skos:altLabel> - <skos:altLabel>Ornithopus sativus</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#LimedUrbanSewageSludge"> - <skos:altLabel>limed urban sewage sludge</skos:altLabel> - <skos:altLabel>Limed urban sewage sludge</skos:altLabel> - <skos:prefLabel>Limed urban sewage sludge</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Sludge"/> - <skos:altLabel>limedurbansewagesludge</skos:altLabel> - <skos:altLabel>LimedUrbanSewageSludge</skos:altLabel> - <rdfs:label>LimedUrbanSewageSludge</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#GlycineMax"> - <skos:altLabel>glycine max</skos:altLabel> - <skos:altLabel>glycinemax</skos:altLabel> - <skos:altLabel>GlycineMax</skos:altLabel> - <skos:altLabel>Soybean</skos:altLabel> - <skos:altLabel>soja</skos:altLabel> - <skos:altLabel>soy</skos:altLabel> - <skos:altLabel>soybean</skos:altLabel> - <skos:prefLabel>Glycine max</skos:prefLabel> - <skos:altLabel>Glycine max</skos:altLabel> - <skos:altLabel>soya bean</skos:altLabel> - <skos:altLabel>soya</skos:altLabel> - <rdfs:label>GlycineMax</rdfs:label> - <skos:altLabel>soy bean</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>Soja</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CompostedHorseManure"> - <skos:altLabel>composted horse manure</skos:altLabel> - <skos:altLabel>Composted horse manure</skos:altLabel> - <skos:prefLabel>Composted horse manure</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>compostedhorsemanure</skos:altLabel> - <skos:altLabel>CompostedHorseManure</skos:altLabel> - <rdfs:label>CompostedHorseManure</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SpringTurnip"> - <skos:altLabel>spring turnip</skos:altLabel> - <skos:altLabel>Spring turnip</skos:altLabel> - <skos:prefLabel>Spring turnip</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>springturnip</skos:altLabel> - <skos:altLabel>SpringTurnip</skos:altLabel> - <rdfs:label>SpringTurnip</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#KilogramPerM2ToMegagramPerHectareConversion"> - <skos:prefLabel>KilogramPerM2ToMegagramPerHectareConversion</skos:prefLabel> - <skos:altLabel>kilogramperm2tomegagramperhectareconversion</skos:altLabel> - <skos:altLabel>KilogramPerM2ToMegagramPerHectareConversion</skos:altLabel> - <rdfs:label>KilogramPerM2ToMegagramPerHectareConversion</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CompostedSolidPhaseOfDigestate"> - <skos:altLabel>composted solid phase of digestate</skos:altLabel> - <skos:altLabel>Composted solid phase of digestate</skos:altLabel> - <skos:prefLabel>Composted solid phase of digestate</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Compost"/> - <skos:altLabel>compostedsolidphaseofdigestate</skos:altLabel> - <skos:altLabel>CompostedSolidPhaseOfDigestate</skos:altLabel> - <rdfs:label>CompostedSolidPhaseOfDigestate</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#LiquidPhaseOfDigestateOfCoverCropsAndOtherWastes"> - <skos:altLabel>liquid phase of digestate of cover crops and other wastes</skos:altLabel> - <skos:altLabel>Liquid phase of digestate of cover crops and other wastes</skos:altLabel> - <skos:prefLabel>Liquid phase of digestate of cover crops and other wastes</skos:prefLabel> - <skos:altLabel>liquidphaseofdigestateofcovercropsandotherwastes</skos:altLabel> - <skos:altLabel>LiquidPhaseOfDigestateOfCoverCropsAndOtherWastes</skos:altLabel> - <rdfs:label>LiquidPhaseOfDigestateOfCoverCropsAndOtherWastes</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#calciumCarbonate"> - <skos:altLabel>CaCO3</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#FileInputs"/> - <skos:prefLabel>calcium carbonate</skos:prefLabel> - <skos:altLabel>calciumCarbonate</skos:altLabel> - <skos:altLabel>calciumcarbonate</skos:altLabel> - <skos:altLabel>calcium carbonate</skos:altLabel> - <rdfs:label>calciumCarbonate</rdfs:label> - <rdfs:comment>pH of the soil in water. -</rdfs:comment> - <skos:altLabel>caco3</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SummerBarley"> - <skos:altLabel>summer barley</skos:altLabel> - <skos:altLabel>Summer barley</skos:altLabel> - <skos:prefLabel>Summer barley</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>summerbarley</skos:altLabel> - <skos:altLabel>SummerBarley</skos:altLabel> - <rdfs:label>SummerBarley</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#AnimalResidue"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#CarbonInputFromOrganicFertilization"/> - <skos:altLabel>animal residue</skos:altLabel> - <skos:altLabel>Animal residue</skos:altLabel> - <skos:prefLabel>Animal residue</skos:prefLabel> - <skos:altLabel>animalresidue</skos:altLabel> - <skos:altLabel>AnimalResidue</skos:altLabel> - <rdfs:label>AnimalResidue</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#KilogramPerM2"> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Units"/> - <skos:altLabel>kg/m2</skos:altLabel> - <skos:prefLabel>KilogramPerM2</skos:prefLabel> - <csopra:hasConversion rdf:resource="http://csopralibs.org#KilogramPerM2ToMegagramPerHectareConversion"/> - <skos:altLabel>kilogramperm2</skos:altLabel> - <skos:altLabel>KilogramPerM2</skos:altLabel> - <rdfs:label>KilogramPerM2</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#DigestateOfBovineManure(dryAD)"> - <skos:altLabel>digestate of bovine manure (dry ad)</skos:altLabel> - <skos:altLabel>Digestate of bovine manure (dry AD)</skos:altLabel> - <skos:prefLabel>Digestate of bovine manure (dry AD)</skos:prefLabel> - <skos:altLabel>digestateofbovinemanure(dryad)</skos:altLabel> - <skos:altLabel>DigestateOfBovineManure(dryAD)</skos:altLabel> - <rdfs:label>DigestateOfBovineManure(dryAD)</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SummerWheat"> - <skos:altLabel>SummerWheat</skos:altLabel> - <skos:prefLabel>Summer wheat</skos:prefLabel> - <skos:altLabel>Summer wheat</skos:altLabel> - <skos:altLabel>summer wheat</skos:altLabel> - <skos:altLabel>blé dur</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <rdfs:label>SummerWheat</rdfs:label> - <skos:altLabel>durum wheat</skos:altLabel> - <skos:altLabel>summerwheat</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SummerTriticale"> - <skos:altLabel>summer triticale</skos:altLabel> - <skos:altLabel>Summer triticale</skos:altLabel> - <skos:prefLabel>Summer triticale</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>summertriticale</skos:altLabel> - <skos:altLabel>SummerTriticale</skos:altLabel> - <rdfs:label>SummerTriticale</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#NoTill"> - <skos:altLabel>no till</skos:altLabel> - <skos:altLabel>No till</skos:altLabel> - <skos:prefLabel>No till</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#SoilTillage"/> - <skos:altLabel>notill</skos:altLabel> - <skos:altLabel>NoTill</skos:altLabel> - <rdfs:label>NoTill</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#MalvaNeglecta"> - <skos:altLabel>dwarf mallow</skos:altLabel> - <skos:altLabel>feed mallow</skos:altLabel> - <rdfs:label>MalvaNeglecta</rdfs:label> - <skos:altLabel>Malva neglecta</skos:altLabel> - <skos:altLabel>roundleaf mallow</skos:altLabel> - <skos:altLabel>cheeseplant</skos:altLabel> - <skos:altLabel>buttonweed</skos:altLabel> - <skos:altLabel>MalvaNeglecta</skos:altLabel> - <skos:prefLabel>Malva neglecta</skos:prefLabel> - <skos:altLabel>malva neglecta</skos:altLabel> - <skos:altLabel>mallow</skos:altLabel> - <skos:altLabel>malvaneglecta</skos:altLabel> - <skos:altLabel>cheeseweed</skos:altLabel> - <skos:altLabel>common mallow</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SugarBeets"> - <skos:altLabel>betterave sucrière</skos:altLabel> - <skos:altLabel>SugarBeets</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>sugarbeets</skos:altLabel> - <skos:altLabel>sugar beets</skos:altLabel> - <rdfs:label>SugarBeets</rdfs:label> - <skos:altLabel>Sugar beets</skos:altLabel> - <skos:altLabel>Betterave Sucrière</skos:altLabel> - <skos:prefLabel>Sugar beets</skos:prefLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#BareSoil"> - <skos:altLabel>bare soil</skos:altLabel> - <skos:altLabel>Bare Soil</skos:altLabel> - <skos:prefLabel>Bare Soil</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>baresoil</skos:altLabel> - <skos:altLabel>BareSoil</skos:altLabel> - <rdfs:label>BareSoil</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#HelianthusAnnuus"> - <skos:altLabel>helianthusannuus</skos:altLabel> - <rdfs:label>HelianthusAnnuus</rdfs:label> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:prefLabel>Helianthus annuus</skos:prefLabel> - <skos:altLabel>Helianthus annuus</skos:altLabel> - <skos:altLabel>tournesol</skos:altLabel> - <skos:altLabel>Tournesol</skos:altLabel> - <skos:altLabel>sunflower</skos:altLabel> - <skos:altLabel>HelianthusAnnuus</skos:altLabel> - <skos:altLabel>helianthus annuus</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#pH"> - <rdfs:comment>pH of the soil in water. -</rdfs:comment> - <skos:prefLabel>pH</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#FileInputs"/> - <skos:altLabel>ph</skos:altLabel> - <skos:altLabel>pH</skos:altLabel> - <rdfs:label>pH</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Agro-industrialSludge"> - <skos:altLabel>agro-industrial sludge</skos:altLabel> - <skos:altLabel>Agro-industrial sludge</skos:altLabel> - <skos:prefLabel>Agro-industrial sludge</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#Sludge"/> - <skos:altLabel>agro-industrialsludge</skos:altLabel> - <skos:altLabel>Agro-industrialSludge</skos:altLabel> - <rdfs:label>Agro-industrialSludge</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#LactucaSativa"> - <skos:altLabel>lettuce</skos:altLabel> - <skos:altLabel>lactuca sativa</skos:altLabel> - <skos:altLabel>Lactuca sativa</skos:altLabel> - <skos:prefLabel>Lactuca sativa</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>lactucasativa</skos:altLabel> - <skos:altLabel>LactucaSativa</skos:altLabel> - <rdfs:label>LactucaSativa</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Pea-vetchMixture"> - <skos:altLabel>pea-vetch mixture</skos:altLabel> - <skos:altLabel>Pea-vetch mixture</skos:altLabel> - <skos:prefLabel>Pea-vetch mixture</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>pea-vetchmixture</skos:altLabel> - <skos:altLabel>Pea-vetchMixture</skos:altLabel> - <rdfs:label>Pea-vetchMixture</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#OtherDigestate"> - <skos:altLabel>other digestate</skos:altLabel> - <skos:altLabel>Other digestate</skos:altLabel> - <skos:prefLabel>Other digestate</skos:prefLabel> - <skos:altLabel>otherdigestate</skos:altLabel> - <skos:altLabel>OtherDigestate</skos:altLabel> - <rdfs:label>OtherDigestate</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CloverMixture"> - <skos:altLabel>clover mixture</skos:altLabel> - <skos:altLabel>Clover mixture</skos:altLabel> - <skos:prefLabel>Clover mixture</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>clovermixture</skos:altLabel> - <skos:altLabel>CloverMixture</skos:altLabel> - <rdfs:label>CloverMixture</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#TrifoliumIncarnatum"> - <skos:altLabel>TrifoliumIncarnatum</skos:altLabel> - <skos:prefLabel>Trifolium incarnatum</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>trifolium incarnatum</skos:altLabel> - <skos:altLabel>winter incarnate clover</skos:altLabel> - <skos:altLabel>summer incarnate clover</skos:altLabel> - <rdfs:label>TrifoliumIncarnatum</rdfs:label> - <skos:altLabel>trifoliumincarnatum</skos:altLabel> - <skos:altLabel>Trifolium incarnatum</skos:altLabel> - <skos:altLabel>incarnate clover</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#RawDigestateOfCoverCropsAndOtherWastes"> - <skos:altLabel>raw digestate of cover crops and other wastes</skos:altLabel> - <skos:altLabel>Raw digestate of cover crops and other wastes</skos:altLabel> - <skos:prefLabel>Raw digestate of cover crops and other wastes</skos:prefLabel> - <skos:altLabel>rawdigestateofcovercropsandotherwastes</skos:altLabel> - <skos:altLabel>RawDigestateOfCoverCropsAndOtherWastes</skos:altLabel> - <rdfs:label>RawDigestateOfCoverCropsAndOtherWastes</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#SilageCorn"> - <skos:altLabel>Maïs Fourrage</skos:altLabel> - <skos:altLabel>silagecorn</skos:altLabel> - <skos:altLabel>SilageCorn</skos:altLabel> - <rdfs:label>SilageCorn</rdfs:label> - <skos:altLabel>Silage corn</skos:altLabel> - <skos:altLabel>silage maize</skos:altLabel> - <skos:prefLabel>Silage corn</skos:prefLabel> - <skos:altLabel>maïs fourrage</skos:altLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>silage corn</skos:altLabel> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#Algae"> - <skos:prefLabel>Algae</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#VegetalResidue"/> - <skos:altLabel>algae</skos:altLabel> - <skos:altLabel>Algae</skos:altLabel> - <rdfs:label>Algae</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://purl.obolibrary.org/obo/agro-edit.owl#TrifoliumSubterraneum"> - <skos:altLabel>creeping clover</skos:altLabel> - <skos:altLabel>trifolium subterraneum</skos:altLabel> - <skos:altLabel>Trifolium subterraneum</skos:altLabel> - <skos:prefLabel>Trifolium subterraneum</skos:prefLabel> - <rdfs:subClassOf rdf:resource="http://csopralibs.org#PlantSpecies"/> - <skos:altLabel>trifoliumsubterraneum</skos:altLabel> - <skos:altLabel>TrifoliumSubterraneum</skos:altLabel> - <rdfs:label>TrifoliumSubterraneum</rdfs:label> - </owl:Class> - <owl:Class rdf:about="http://csopralibs.org#CompostedChickenDroppings"> - <skos:altLabel>compost de fientes</skos:altLabel> - <skos:altLabel>composted chicken droppings</skos:altLabel> - <skos:altLabel>Composted chicken droppings</skos:altLabel> - 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<skos:altLabel>c from wood</skos:altLabel> - <oboe:hasMeasurement rdf:resource="http://csopralibs.org#CFromWood"/> - <skos:altLabel>CFromWood</skos:altLabel> - <skos:altLabel>cfromwood</skos:altLabel> - <skos:altLabel>c_woody_elements</skos:altLabel> - <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> - <oboe:ofEntity rdf:resource="http://csopralibs.org#CFromWood"/> - <rdf:type rdf:resource="http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#Measurement"/> - <rdfs:label>CFromWood</rdfs:label> - <skos:altLabel>C_WOODY_ELEMENTS</skos:altLabel> - <rdfs:comment>Amount of organic matter from hedges or agroforestry. Unit: t/ha/yr. -</rdfs:comment> - <skos:altLabel>C from wood</skos:altLabel> - <skos:prefLabel>C from wood</skos:prefLabel> - <oboe:usesStandard rdf:resource="http://csopralibs.org#MegagramPerHectarePerYear"/> - </oboe:Observation> - </rdfs:domain> - </owl:DatatypeProperty> - <owl:DatatypeProperty rdf:about="http://csopralibs.org#hasYield"> - <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#double"/> - <rdfs:domain rdf:resource="http://csopralibs.org#Yield"/> - </owl:DatatypeProperty> - <owl:DatatypeProperty rdf:about="http://csopralibs.org#hasPETMeas"> - <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#double"/> - <rdfs:domain rdf:resource="http://csopralibs.org#PETMeas"/> - </owl:DatatypeProperty> - <owl:DatatypeProperty rdf:about="http://csopralibs.org#hasStartYear"> - <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#double"/> - <rdfs:domain rdf:resource="http://csopralibs.org#StartYear"/> - </owl:DatatypeProperty> - <owl:DatatypeProperty rdf:about="http://csopralibs.org#hasLongitude"> - <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#double"/> - <rdfs:domain rdf:resource="http://csopralibs.org#Longitude"/> - </owl:DatatypeProperty> - <owl:DatatypeProperty rdf:about="http://csopralibs.org#hasNUM"> - <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#integer"/> - <rdfs:domain rdf:resource="http://csopralibs.org#NUM"/> - </owl:DatatypeProperty> -</rdf:RDF>
--- a/run.r Fri Aug 23 10:09:37 2024 +0000 +++ b/run.r Fri Aug 23 13:19:04 2024 +0000 @@ -7,7 +7,7 @@ # Default values for optional parameters url <- "https://coby.infosol.inrae.fr:8080/semantify/" srcDir <- NULL - part <- "modeltoolbox_sem_sep" + part <- "modeltoolbox" DS <- T NBCores <- 1 # Parse arguments @@ -35,14 +35,10 @@ if (grepl("^--srcOut=", arg)) { srcOut <- sub("^--srcOut=", "", arg) } - - if (grepl("^--semPath=", arg)) { - semPath <- sub("^--semPath=", "", arg) - } } - list(url = url, srcDir = srcDir, part = part, DS = DS, NBCores = NBCores, srcOut = srcOut, semPath = semPath) + list(url = url, srcDir = srcDir, part = part, DS = DS, NBCores = NBCores, srcOut = srcOut) } argus <- parse_args() @@ -53,7 +49,6 @@ NBCores <- argus[["NBCores"]] srcOut <- argus[["srcOut"]] -semPath <- argus[["semPath"]] if (!endsWith(srcOut, "/")) { srcOut <- paste0(srcOut, "/") @@ -66,6 +61,14 @@ # DS=TRUE # NBCores=10 +ppi <- list( + weatherRetrievalMethod = "service", + srcDir = srcDir, + doSemantify = DS, + weatherRetrievalURL = "https://147.100.203.110/climate", + semantifierServiceURL = url + ) + # MTB{{{ if (part == "modeltoolbox") { @@ -81,40 +84,19 @@ } #}}} -if (part == "modeltoolbox_sem_sep") { - DS <- F - print("Setting DS to F. Will semantify outside of the csoprapreprocessor functions") - f0 <- function(){ - csopratools::semantify( - inputDir = srcDir, - outputDir = srcDir, - name = "carboseq", - # use = "service", - URL = url, - use = "java", - semantifierRootPath = semPath, - extFileNames = paste0(c("crop", "soil", "units"), ".csv") - ) - print("between semantify and load") - modeltoolbox::loadCSVs(maxCores = NBCores, cinputCalculator = "cinest", - preprocessorInputs = ppi) - print("between load an sim") - modeltoolbox::runSims(maxCores = NBCores) - res <- modeltoolbox::getYearlySOCResults() - fileName <- "resRun.RData" - filePath <- file.path(srcOut, fileName) - save(res, file = filePath) - } +# prepro{{ +if (part == "csoprapreprocessor") { +f0 <- function(){ + path <- this.path::this.dir() + print(path) + setwd(path) + setwd("../..") + source("src/csoprapreprocessor/src-utils.r") + CsopPre$Tool$sourceCodeFiles() + CsopPre$runPreprocessor(name = "carboseq", maxCores = NBCores, preprocessorInputs = ppi) } - -ppi <- list( - weatherRetrievalMethod = "service", - srcDir = srcDir, - doSemantify = DS, - weatherRetrievalURL = "https://147.100.203.110/climate", - semantifierServiceURL = url - ) - +} +#}}} print(url) print(srcDir) @@ -122,7 +104,6 @@ print(DS) print(NBCores) print(f0) - f0()