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comparison src/cmd_gama_headless_legacy_gen.sh @ 11:770e0dde4735 draft default tip

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planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/gama/GAMA_HEADLESS_LEGACY/galaxy-tools/gama_legacy_gen commit 8731d8cb947d6b7b65eb0fde51a4b0f44c2f4406-dirty
author siwaa
date Fri, 20 Dec 2024 23:16:10 +0000
parents 382cb366533a
children
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10:f57ea38d67c5 11:770e0dde4735
21 21
22 EXPERIMENT_NAME=$1 22 EXPERIMENT_NAME=$1
23 #EXPERIMENT_NAME="prey_predator" 23 #EXPERIMENT_NAME="prey_predator"
24 24
25 HOME=$(echo $PWD) 25 HOME=$(echo $PWD)
26 26 cd software/gama-platform/headless;
27 # !!! Passage en variables d'environnement 27 /bin/bash MY_gama-headless.sh -xml ${EXPERIMENT_NAME} ${HOME}/inputs/model.gaml ${HOME}/outputs/file.xml
28 export MY_JAVA_DIR=${HOME}/_java
29 export MY_TEMP_DIR=${HOME}/_temp_dir
30 mkdir -p ${MY_TEMP_DIR}
31 export MY_CONFIGURATION_DIR=${HOME}/configuration
32 mkdir -p ${MY_CONFIGURATION_DIR}
33 export MY_DATA_DIR=${HOME}/_data
34 mkdir -p ${MY_DATA_DIR}
35
36 cd /opt/gama-platform/headless;
37 #/bin/bash MY_gama-headless.sh -xml ${EXPERIMENT_NAME} ${HOME}/inputs/model.gaml ${HOME}/outputs/file.xml
38 /bin/bash MY_gama-headless.sh -v -xml ${EXPERIMENT_NAME} ${HOME}/inputs/model.gaml ${HOME}/outputs/file.xml