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changeset 6:7ee254e15010 draft

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planemo upload for repository https://forgemia.inra.fr/nathalie.rousse/use/-/tree/gama/GAMA_HEADLESS_LEGACY/galaxy-tools/gama_legacy_gen commit 563a64ae67989c48e90fa377239005e8824757a8-dirty
author siwaa
date Mon, 09 Dec 2024 18:33:47 +0000
parents 07dcd2acad0b
children 94109cdb0d47
files gama_legacy_gen.xml src/cmd_gama_headless_legacy_gen.sh
diffstat 2 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/gama_legacy_gen.xml	Mon Dec 09 18:09:22 2024 +0000
+++ b/gama_legacy_gen.xml	Mon Dec 09 18:33:47 2024 +0000
@@ -5,7 +5,7 @@
   <requirements>
 
     <!-- singularity --> 
-    <container type="singularity">oras://registry.forgemia.inra.fr/nathalie.rousse/use/gama_headless:b3a6e415d03e61fd21e0f0f1c31e75e7f97d66a0</container>
+    <container type="singularity">oras://registry.forgemia.inra.fr/nathalie.rousse/use/gama_headless:563a64ae67989c48e90fa377239005e8824757a8</container>
 
     <!-- image locale
     <container type="singularity">/home/nrousse/workspace_git/SIWAA_regroup/USE_branch_gama/use/GAMA_HEADLESS_LEGACY/containers/gama_headless.simg</container -->
--- a/src/cmd_gama_headless_legacy_gen.sh	Mon Dec 09 18:09:22 2024 +0000
+++ b/src/cmd_gama_headless_legacy_gen.sh	Mon Dec 09 18:33:47 2024 +0000
@@ -28,6 +28,7 @@
 export MY_JAVA_DIR=${HOME}/_java
 export MY_TEMP_DIR=${HOME}
 export MY_CONFIGURATION_DIR=${HOME}/configuration
+export MY_DATA_DIR=${HOME}
 
 cd /opt/gama-platform/headless;
 /bin/bash MY_gama-headless.sh -xml ${EXPERIMENT_NAME} ${HOME}/inputs/model.gaml ${HOME}/outputs/file.xml