Mercurial > repos > siwaa > redelac_stics_g

diff redelacSticsInputGenerator.bash @ 14:812bb8097dac draft

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"planemo upload for repository https://forgemia.inra.fr/redelac commit d16b9ecdb4dd51b69a6aaa4ab298b82455fe0267"
author siwaa
date Tue, 12 Dec 2023 10:38:20 +0000
parents 3db1f57029a7
children 413cec4dfe5f
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line diff
--- a/redelacSticsInputGenerator.bash	Fri Oct 27 09:17:06 2023 +0000
+++ b/redelacSticsInputGenerator.bash	Tue Dec 12 10:38:20 2023 +0000
@@ -17,10 +17,10 @@
 cp $9 JavaSTICS-1.5.1-STICS-10.0.0/WS/Ini.csv &&
 cp ${10} JavaSTICS-1.5.1-STICS-10.0.0/WS/Station.csv &&
 cd JavaSTICS-1.5.1-STICS-10.0.0 &&
-if [[ "$11" != "noAdditionalPlantOrConfig" ]]
+(if [[ "$11" != "noAdditionalPlantOrConfig" ]]
 then
-   unzip -o ${10}
-fi
+   unzip -q -o ${11}
+fi) &&
 /usr/bin/time -p -o ./bashlog Rscript --verbose $4/redelacSticsInputGenerator.R $1 $2 $3 &&
 echo "Step 1, time to run the R script:" &&
 echo "=================================" &&