view stics4carsolel.xml @ 5:ad767c79a776 draft default tip

"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 2d336eae127279c9c61fc66d73da5d356ac95286"
author siwaa
date Tue, 03 Jan 2023 16:07:49 +0000
parents 6a77442a3598
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<tool id="Stics4CarSolEl" name="Stics4CarSolEl" version="1.0.0">
  <description>Vle Stics simulations in rotation parallelized by cvle for the CarSolEl project</description>
  <requirements>
    <container type="singularity">docker://registry.forgemia.inra.fr/record/carsolel</container>
  </requirements>
  <command detect_errors="exit_code">
    bash $__tool_directory__/stics4carsolel.bash \${GALAXY_SLOTS:-2} ${cvle_plan} ${output_file} ${meteo_archive} ${station_archive} ${soil_archive};
  </command>
<inputs>
  <param name="cvle_plan" type="data" format="csv" label="Select a cvle plan in (csv file)"/>
  <param name="meteo_archive" type="data" format="zip" label="Select a meteo archive (zip file)"/>
  <param name="station_archive" type="data" format="zip" label="Select a station archive (zip file)"/>
  <param name="soil_archive" type="data" format="zip" label="Select a soil archive (zip file)"/>
</inputs>
<outputs>
  <data format='csv' name="output_file" label="Stics simulations results"/>
</outputs>
<tests>
  <test>
    <param name="cvle_plan" value="inputs/dummy50.csv" ftype="csv" />
    <param name="meteo_archive" value="inputs/meteo.zip" ftype="zip" />
    <param name="station_archive" value="inputs/station.zip" ftype="zip" />
    <param name="soil_archive" value="inputs/sol.zip" ftype="zip" />
    <output name="output_file" ftype="csv">
      <assert_contents>
        <has_n_lines n="151" />
      </assert_contents>
    </output>
  </test>
</tests>
<help>
the Stics4CarSolEl simulator
============================

credits
-------

-  Wrapper Maintainer: Patrick Chabrier patrick.chabrier@inrae.fr
-  Tool Maintainer: Eric Casellas eric.casellas@inrae.fr
-  Tool Site: https://forgemia.inra.fr/record/carsolel
-  Copyright: INRAE
</help>
</tool>