Mercurial > repos > siwaa > carboseq_s
diff carboseqSplit.xml @ 5:3e7978af2ba2 draft
"planemo upload for repository https://forgemia.inra.fr/carboseq/record-projet-carboseq/-/tree/5f761ea7dab0a6f8c978cbbe4946e16edc6d032e/toos/CarboSeqSimulator commit 5f761ea7dab0a6f8c978cbbe4946e16edc6d032e-dirty"
author | siwaa |
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date | Wed, 28 Aug 2024 14:53:30 +0000 |
parents | |
children | 20886bc40659 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/carboseqSplit.xml Wed Aug 28 14:53:30 2024 +0000 @@ -0,0 +1,31 @@ +<tool id="CarboSeqSplit" name="CarboSeqSplit" version="1.0.1"> + <description>To split input data of CarboSeq</description> + <requirements> + <container type="singularity">docker://registry.forgemia.inra.fr/carboseq/record-projet-carboseq:latest</container> + </requirements> + <command detect_errors="exit_code"><![CDATA[ + python $__tool_directory__/csopraSplitInput.py ${inputFile} ${chunkSize} + ]]> + </command> + <inputs> + <param name="inputFile" type="data" format="zip" label="CarboSeq input (zip)"/> + <param name="chunkSize" type="integer" value="1" min= "1" max= "20000" format="csv" label="chunck size" help="chunck size" /> + </inputs> + <outputs> + <collection name="splited" type="list" label="A list of CarboSeq input (zip)"> + <discover_datasets pattern="__name_and_ext__" directory="outputs"/> + </collection> + </outputs> +<tests> +</tests> +<help> +the CarboSeq CarboseqSimulator tool +=================================== + +credits +------- +- Wrapper Maintainer: Patrick Chabrier patrick.chabrier@inrae.fr +- Tool Site: https://forgemia.inra.fr/carboseq/record-projet-carboseq +- Copyright: INRAE +</help> +</tool>