Mercurial > repos > siwaa > redelac_stics_e

comparison redelacPlanExpander.xml @ 0:bc7ae8dd3d3c draft

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"planemo upload for repository https://forgemia.inra.fr/redelac commit 841d6c6ada2dad3dd575d25aab620491fda5c611"
author siwaa
date Mon, 19 Jun 2023 15:51:01 +0000
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1 <tool id="redelacPlanExpander" name="redelacPlanExpander" version="1.0.0">
2 <description>to expand REDELAC situations according to a plan</description>
3 <requirements>
4 <container type="singularity">docker://registry.forgemia.inra.fr/redelac/redelac-toolbox:latest</container>
5 </requirements>
6 <command detect_errors="aggressive">
7 <![CDATA[
8 python $__tool_directory__/redelacPlanExpander.py ${typeOfRotation} ${USMs} ${Liste_plantes} ${REDELACplan} ${mailles} ${USMsExp} ${SuccessionsExp} ${Stations} ${aclimParHorizon} ${latitudeMailleDrias} ${StationsExp}
9 ]]>
10 </command>
11 <inputs>
12 <param name="typeOfRotation" type="select" label="Select the type of rotation">
13 <option value="PP">Prairie Permanente</option>
14 <option value="GC">Grande Culture</option>
15 </param>
16 <param name="REDELACplan" type="data" format="csv" label="Select a redelac spatial plan (csv)"/>
17 <param name="USMs" type="data" format="csv" label="Select a USMs list template (csv)"/>
18 <param name="Liste_plantes" type="data" format="csv" label="Select a Liste_plantes (csv)"/>
19 <param name="Stations" type="data" format="csv" label="Select a Stations (csv)"/>
20 <param name="mailles" type="data" format="csv" label="Select mailles files with link between DRIAS and Safran (csv)"/>
21 <param name="aclimParHorizon" type="data" format="csv" label="Select a aclimParHorizon (csv)"/>
22 <param name="latitudeMailleDrias" type="data" format="csv" label="Select a latitudeMailleDrias(csv)"/>
23 </inputs>
24 <outputs>
25 <data format="csv" name="USMsExp" label="Expanded list of USMs (csv)"/>
26 <data format="csv" name="StationsExp" label="Expanded list of meteo Stations (csv)"/>
27 <data format="csv" name="SuccessionsExp" label="Expanded list of successions (csv)"/>
28 </outputs>
29 <tests>
30 </tests>
31 <help>
32 Documentation
33 -------------
34 A tool to expand Stics situations according to a REDELAC spatial plan.
35
36 Credits
37 -------
38 - Galaxy Tool Maintainer: Patrick Chabrier patrick.chabrier@inrae.fr
39 - Copyright: INRAE
40 </help>
41 </tool>