Mercurial > repos > siwaa > redelac_stics_g

annotate redelacSticsInputGenerator.xml @ 7:fb6f7d60508d draft

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"planemo upload for repository https://forgemia.inra.fr/redelac commit d1c69d78e9ccfe06ceb7609dce59b438cd94d9d8"
author siwaa
date Thu, 20 Jul 2023 16:18:59 +0000
parents 4f8d87b9c246
children 0625e6a639ea
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1 <tool id="redelacSticsInputGenerator" name="redelacSticsInputGenerator" version="1.0.1">
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2 <description>to run generate Stics Inputs for REDELAC</description>
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3 <requirements>
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4 <container type="singularity">docker://registry.forgemia.inra.fr/quaysofthestics/sticsquays/rstudio_stics_test:10.0.0</container>
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5 </requirements>
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6 <command detect_errors="aggressive">
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7 <![CDATA[
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8 bash $__tool_directory__/redelacSticsInputGenerator.bash ${IterUsmX} $__tool_directory__ ${Workspace} ${Climat} ${USMs} ${Tec} ${Ini} ${Station} ${GeneratedWorkspace}
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9 ]]>{
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10 </command>
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11 <inputs>
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12 <param name="Workspace" type="data" format="zip" label="Select a stics Workspace (zip file)"/>
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13 <param name="Climat" type="data" format="zip" label="Select a climat scenario (zip file)"/>
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14 <param name="USMs" type="data" format="csv" label="Select the USMs sheet (csv)"/>
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15 <param name="Tec" type="data" format="csv" label="Select the Tec sheet (csv)"/>
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16 <param name="Ini" type="data" format="csv" label="Select the Ini sheet (csv)"/>
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17 <param name="Station" type="data" format="csv" label="Select the Station sheet (csv)"/>
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18 <param name="Tag" type="text" value="" label="Outputs tag"/>
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19 <param name="IterUsmX" type="boolean" checked="true" truevalue="usmx_one_after_other" falsevalue="usmx_at_once"/>
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20 </inputs>
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21 <outputs>
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22 <data format="zip" name="GeneratedWorkspace"
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23 label="GeneratedWorkspace${Tag}">
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24 </data>
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25 </outputs>
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26 <tests>
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27 </tests>
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28 <help>
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29 *The usage of this tool is restricted to the user of the stics_authorized group.*
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30
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31 *To be granted, apply to the Project Stics Team and then request to SIWAA*
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32
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33 Documentation
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34 -------------
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35 A tool to generate Stics Inputs according to a plan for REDELAC
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36
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37 Credits
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38 -------
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39 - Wrapped Tool Author: https://www6.paca.inrae.fr/stics_eng/About-us/Project-Stics-Team
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40 - Stics Site: https://www6.paca.inra.fr/stics_eng
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41 - Galaxy Tool Maintainer: Patrick Chabrier patrick.chabrier@inrae.fr
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42 - Copyright: INRAE
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43 </help>
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44 </tool>