Mercurial > repos > siwaa > redelac_stics_t

diff redelacSticsTool.xml @ 15:af807768332e draft default tip

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"planemo upload for repository https://forgemia.inra.fr/redelac commit 179e64aac208ae8af4d7416a7d5ff4b9da572850"
author siwaa
date Fri, 06 Feb 2026 13:28:00 +0000
parents 30d7b0210581
children
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--- a/redelacSticsTool.xml	Fri Dec 05 14:39:14 2025 +0000
+++ b/redelacSticsTool.xml	Fri Feb 06 13:28:00 2026 +0000
@@ -1,7 +1,7 @@
-<tool id="redelacSticsTool" name="redelacSticsTool" version="1.0.16">
+<tool id="redelacSticsTool" name="redelacSticsTool" version="1.0.17">
   <description>to run Stics for REDELAC</description>
   <requirements>
-    <container type="singularity">docker://registry.forge.inrae.fr/redelac/redelac-toolbox/sticsrpacks:4bf27fdaedcc1ffe10a6017da2255f1d6e751796
+    <container type="singularity">docker://registry.forge.inrae.fr/redelac/redelac-toolbox/sticsrpacks:5337507635242b3ad0f3559a1a6b666512ecf002
     </container>
   </requirements>
   <command detect_errors="aggressive">
@@ -16,7 +16,7 @@
              #else
                 parallel=sequential &&
              #end if
-	        bash $__tool_directory__/redelacSticsTool.bash ${REDELAC.optim} \${parallel} \${GALAXY_SLOTS:-4} $__tool_directory__ ${Workspace} ${Climat} ${USMs} ${Tec} ${Ini} ${Station} \${additional} ${GeneratedWorkspace} ${compress} ${outputsOnly} ${Scenario} ${SimulationResults} ${SuccessionPlan}
+	        bash $__tool_directory__/redelacSticsTool.bash ${REDELAC.optim} \${parallel} \${GALAXY_SLOTS:-4} $__tool_directory__ ${Workspace} ${Climat} ${USMs} ${Tec} ${Ini} ${Station} \${additional} ${GeneratedWorkspace} ${compress} ${outputsOnly} ${Scenario} ${SimulationResults} ${SuccessionPlan} ${outpuType}
      ]]>
   </command>
   <inputs>
@@ -39,6 +39,11 @@
     </conditional>
     <param name="outputsOnly" type="boolean" checked="true" truevalue="yes" falsevalue="no" label="To get results only"/>
     <param name="compress" type="boolean" checked="true" truevalue="-6" falsevalue="-0" label="To compress or not the output(compressing does slow down the job)"/>
+    <param name="outpuType" type="select" label="To choose the outpuType of results (rds+csv, parquet, both)">
+      <option value="parquet">parquet</option>
+      <option value="rds+csv">rds+csv</option>
+      <option value="both" selected="true">both</option>
+    </param>
   </inputs>
   <outputs>
     <data format="zip" name="SimulationResults"