Mercurial > repos > siwaa > redelac_stics_t

annotate redelacSticsTool.xml @ 15:af807768332e draft default tip

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"planemo upload for repository https://forgemia.inra.fr/redelac commit 179e64aac208ae8af4d7416a7d5ff4b9da572850"
author siwaa
date Fri, 06 Feb 2026 13:28:00 +0000
parents 30d7b0210581
children
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1 <tool id="redelacSticsTool" name="redelacSticsTool" version="1.0.17">
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2 <description>to run Stics for REDELAC</description>
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3 <requirements>
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4 <container type="singularity">docker://registry.forge.inrae.fr/redelac/redelac-toolbox/sticsrpacks:5337507635242b3ad0f3559a1a6b666512ecf002
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5 </container>
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6 </requirements>
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7 <command detect_errors="aggressive">
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8 <![CDATA[
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9 #if $additional:
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10 additional=${additional} &&
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11 #else
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12 additional=noAdditionalPlantOrConfig &&
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13 #end if
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14 #if $REDELAC.optim == 'optim':
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15 parallel=${$REDELAC.parallel} &&
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16 #else
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17 parallel=sequential &&
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18 #end if
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19 bash $__tool_directory__/redelacSticsTool.bash ${REDELAC.optim} \${parallel} \${GALAXY_SLOTS:-4} $__tool_directory__ ${Workspace} ${Climat} ${USMs} ${Tec} ${Ini} ${Station} \${additional} ${GeneratedWorkspace} ${compress} ${outputsOnly} ${Scenario} ${SimulationResults} ${SuccessionPlan} ${outpuType}
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20 ]]>
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21 </command>
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22 <inputs>
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23 <param name="Scenario" type="text" value="scenarioName" label="Scenario Name"/>
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24 <param name="Workspace" type="data" format="zip" label="Select a stics Workspace (zip file)"/>
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25 <param name="Climat" type="data" format="zip" label="Select a climat scenario (zip file)"/>
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26 <param name="USMs" type="data" format="csv" label="Select the USMs sheet (csv)"/>
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27 <param name="Tec" type="data" format="csv" label="Select the Tec sheet (csv)"/>
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28 <param name="Ini" type="data" format="csv" label="Select the Ini sheet (csv)"/>
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29 <param name="Station" type="data" format="csv" label="Select the Station sheet (csv)"/>
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30 <param name="additional" type="data" optional="true" format="zip" label="[optional] Select a zipped archive with folder plant (and or) config (zip file)"/>
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31 <param name="SuccessionPlan" type="data" format="csv" label="Select a plan of succession (csv)"/>
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32 <conditional name="REDELAC">
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33 <param name="optim" type="boolean" checked="true" truevalue="optim" falsevalue="noptim" label="To speed up the xml2txt conversion process by generating file only once"/>
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34 <when value="optim">
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35 <param name="parallel" type="boolean" checked="true" truevalue="parallel" falsevalue="sequential" label="To parallelize the xml2txt conversion process" />
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36 </when>
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37 <when value="noptim">
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38 </when>
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39 </conditional>
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40 <param name="outputsOnly" type="boolean" checked="true" truevalue="yes" falsevalue="no" label="To get results only"/>
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41 <param name="compress" type="boolean" checked="true" truevalue="-6" falsevalue="-0" label="To compress or not the output(compressing does slow down the job)"/>
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42 <param name="outpuType" type="select" label="To choose the outpuType of results (rds+csv, parquet, both)">
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43 <option value="parquet">parquet</option>
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44 <option value="rds+csv">rds+csv</option>
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45 <option value="both" selected="true">both</option>
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46 </param>
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47 </inputs>
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48 <outputs>
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49 <data format="zip" name="SimulationResults"
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50 label="SticsOnResults">
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51 </data>
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52 <data format="zip" name="GeneratedWorkspace"
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53 label="GeneratedWorkspace$">
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54 <filter>outputsOnly == False</filter>
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55 </data>
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56 </outputs>
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57 <tests>
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58 <test>
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59 <param name="compress" value="false" ftype="boolean" />
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60 <param name="outputsOnly" value="false" ftype="boolean" />
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61 <param name="optim" value="true" ftype="boolean" />
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62 <param name="parallel" value="true" ftype="boolean" />
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63 <param name="Workspace" value="input/rot1_3.zip" ftype="zip" />
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64 <param name="Climat" value="input/flat_cnrm-cm5-aladin63_rcp2.6.zip" ftype="zip" />
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65 <param name="USMs" value="input/USMsSheetExp.csv" ftype="csv" />
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66 <param name="Tec" value="input/TecSheet.csv" ftype="csv" />
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67 <param name="Ini" value="input/IniSheet.csv" ftype="csv" />
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68 <param name="Station" value="input/StationsSheetExp.csv" ftype="csv" />
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69 <param name="additional" value="input/conf_rot1_3.zip" ftype="zip" />
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70 <param name="SuccessionPlan" value="input/successionsSheetExp.csv" ftype="csv" />
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71 <output name="GeneratedWorkspace" ftype="zip" >
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72 <assert_contents>
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73 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-NA-1973-PP1\/new_travail.usm">
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74 <has_text text="806_1893-637_NPP1-1-3-PP-NA-1973-PP1" />
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75 </has_archive_member>
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76 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-NA-1974-PP\/new_travail.usm">
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77 <has_text text="806_1893-637_NPP1-1-3-PP-NA-1974-PP" />
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78 </has_archive_member>
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79 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-NA-1975-PP\/new_travail.usm">
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80 <has_text text="806_1893-637_NPP1-1-3-PP-NA-1975-PP" />
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81 </has_archive_member>
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82 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-1976-PPorg\/new_travail.usm">
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83 <has_text text="806_1893-637_NPP1-1-3-PP-ref-1976-PPorg" />
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84 </has_archive_member>
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85 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-1977-PP\/new_travail.usm">
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86 <has_text text="806_1893-637_NPP1-1-3-PP-ref-1977-PP" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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87 </has_archive_member>
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23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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88 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2000-PPorg\/new_travail.usm">
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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89 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2000-PPorg" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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90 </has_archive_member>
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23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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91 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2001-PP\/new_travail.usm">
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92 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2001-PP" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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93 </has_archive_member>
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23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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94 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2002-PP\/new_travail.usm">
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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95 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2002-PP" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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96 </has_archive_member>
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23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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97 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2003-PPorg\/new_travail.usm">
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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98 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2003-PPorg" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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99 </has_archive_member>
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23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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100 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2004-PP\/new_travail.usm">
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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101 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2004-PP" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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102 </has_archive_member>
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103 </assert_contents>
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104 </output>
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105 <output name="SimulationResults" ftype="zip" >
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106 <assert_contents>
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107 <has_archive_member path="analyse_simulations_STICS\/1\/3\/outputs-3-806_1893-637_NPP1-scenarioName.rds">
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108 <has_size value="0" negate="true" />
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109 </has_archive_member>
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110 <has_archive_member path="analyse_simulations_STICS\/1\/3\/outputs-3-806_1893-638_NPP1-scenarioName.rds">
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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111 <has_size value="0" negate="true" />
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112 </has_archive_member>
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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113 <has_archive_member path="analyse_simulations_STICS\/1\/3\/report-3-806_1893-637_NPP1-scenarioName.csv">
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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114 <has_n_lines n="133" />
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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115 </has_archive_member>
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116 <has_archive_member path="analyse_simulations_STICS\/1\/3\/report-3-806_1893-638_NPP1-scenarioName.csv">
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117 <has_n_lines n="133" />
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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118 </has_archive_member>
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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119 </assert_contents>
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120 </output>
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121 </test>
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122 <test>
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123 <param name="compress" value="false" ftype="boolean" />
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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124 <param name="outputsOnly" value="false" ftype="boolean" />
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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125 <param name="optim" value="true" ftype="boolean" />
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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126 <param name="parallel" value="false" ftype="boolean" />
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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127 <param name="Workspace" value="input/rot1_3.zip" ftype="zip" />
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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128 <param name="Climat" value="input/flat_cnrm-cm5-aladin63_rcp2.6.zip" ftype="zip" />
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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129 <param name="USMs" value="input/USMsSheetExp.csv" ftype="csv" />
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130 <param name="Tec" value="input/TecSheet.csv" ftype="csv" />
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131 <param name="Ini" value="input/IniSheet.csv" ftype="csv" />
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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132 <param name="Station" value="input/StationsSheetExp.csv" ftype="csv" />
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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133 <param name="additional" value="input/conf_rot1_3.zip" ftype="zip" />
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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134 <param name="SuccessionPlan" value="input/successionsSheetExp.csv" ftype="csv" />
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135 <output name="GeneratedWorkspace" ftype="zip" >
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136 <assert_contents>
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137 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-NA-1973-PP1\/new_travail.usm">
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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138 <has_text text="806_1893-637_NPP1-1-3-PP-NA-1973-PP1" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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139 </has_archive_member>
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23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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140 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-NA-1974-PP\/new_travail.usm">
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141 <has_text text="806_1893-637_NPP1-1-3-PP-NA-1974-PP" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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142 </has_archive_member>
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23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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143 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-NA-1975-PP\/new_travail.usm">
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144 <has_text text="806_1893-637_NPP1-1-3-PP-NA-1975-PP" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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145 </has_archive_member>
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23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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146 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-1976-PPorg\/new_travail.usm">
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147 <has_text text="806_1893-637_NPP1-1-3-PP-ref-1976-PPorg" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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148 </has_archive_member>
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149 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-1977-PP\/new_travail.usm">
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150 <has_text text="806_1893-637_NPP1-1-3-PP-ref-1977-PP" />
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151 </has_archive_member>
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152 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2000-PPorg\/new_travail.usm">
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153 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2000-PPorg" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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154 </has_archive_member>
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155 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2001-PP\/new_travail.usm">
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156 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2001-PP" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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157 </has_archive_member>
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158 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2002-PP\/new_travail.usm">
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159 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2002-PP" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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160 </has_archive_member>
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23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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161 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2003-PPorg\/new_travail.usm">
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162 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2003-PPorg" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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163 </has_archive_member>
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164 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2004-PP\/new_travail.usm">
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165 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2004-PP" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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166 </has_archive_member>
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167 </assert_contents>
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168 </output>
9
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169 <output name="SimulationResults" ftype="zip" >
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170 <assert_contents>
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171 <has_archive_member path="analyse_simulations_STICS\/1\/3\/outputs-3-806_1893-637_NPP1-scenarioName.rds">
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172 <has_size value="0" negate="true" />
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173 </has_archive_member>
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174 <has_archive_member path="analyse_simulations_STICS\/1\/3\/outputs-3-806_1893-638_NPP1-scenarioName.rds">
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175 <has_size value="0" negate="true" />
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176 </has_archive_member>
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177 <has_archive_member path="analyse_simulations_STICS\/1\/3\/report-3-806_1893-637_NPP1-scenarioName.csv">
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178 <has_n_lines n="133" />
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179 </has_archive_member>
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180 <has_archive_member path="analyse_simulations_STICS\/1\/3\/report-3-806_1893-638_NPP1-scenarioName.csv">
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181 <has_n_lines n="133" />
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182 </has_archive_member>
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183 </assert_contents>
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184 </output>
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185 </test>
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186 <test>
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187 <param name="compress" value="false" ftype="boolean" />
9
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188 <param name="outputsOnly" value="false" ftype="boolean" />
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189 <param name="optim" value="false" ftype="boolean" />
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190 <param name="Workspace" value="input/rot1_3.zip" ftype="zip" />
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191 <param name="Climat" value="input/flat_cnrm-cm5-aladin63_rcp2.6.zip" ftype="zip" />
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192 <param name="USMs" value="input/USMsSheetExp.csv" ftype="csv" />
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193 <param name="Tec" value="input/TecSheet.csv" ftype="csv" />
9
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194 <param name="Ini" value="input/IniSheet.csv" ftype="csv" />
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195 <param name="Station" value="input/StationsSheetExp.csv" ftype="csv" />
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196 <param name="additional" value="input/conf_rot1_3.zip" ftype="zip" />
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197 <param name="SuccessionPlan" value="input/successionsSheetExp.csv" ftype="csv" />
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198 <output name="GeneratedWorkspace" ftype="zip" >
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199 <assert_contents>
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200 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-NA-1973-PP1\/new_travail.usm">
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201 <has_text text="806_1893-637_NPP1-1-3-PP-NA-1973-PP1" />
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202 </has_archive_member>
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203 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-NA-1974-PP\/new_travail.usm">
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204 <has_text text="806_1893-637_NPP1-1-3-PP-NA-1974-PP" />
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205 </has_archive_member>
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206 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-NA-1975-PP\/new_travail.usm">
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207 <has_text text="806_1893-637_NPP1-1-3-PP-NA-1975-PP" />
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208 </has_archive_member>
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209 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-1976-PPorg\/new_travail.usm">
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210 <has_text text="806_1893-637_NPP1-1-3-PP-ref-1976-PPorg" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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211 </has_archive_member>
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212 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-1977-PP\/new_travail.usm">
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213 <has_text text="806_1893-637_NPP1-1-3-PP-ref-1977-PP" />
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214 </has_archive_member>
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215 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2000-PPorg\/new_travail.usm">
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216 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2000-PPorg" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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217 </has_archive_member>
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218 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2001-PP\/new_travail.usm">
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219 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2001-PP" />
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220 </has_archive_member>
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221 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2002-PP\/new_travail.usm">
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222 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2002-PP" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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223 </has_archive_member>
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23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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224 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2003-PPorg\/new_travail.usm">
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225 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2003-PPorg" />
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7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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226 </has_archive_member>
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23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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227 <has_archive_member path="rot1_3\/txt_files\/806_1893-637_NPP1-1-3-PP-ref-2004-PP\/new_travail.usm">
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228 <has_text text="806_1893-637_NPP1-1-3-PP-ref-2004-PP" />
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229 </has_archive_member>
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230 </assert_contents>
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231 </output>
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232 <output name="SimulationResults" ftype="zip" >
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233 <assert_contents>
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234 <has_archive_member path="analyse_simulations_STICS\/1\/3\/outputs-3-806_1893-637_NPP1-scenarioName.rds">
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235 <has_size value="0" negate="true" />
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236 </has_archive_member>
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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237 <has_archive_member path="analyse_simulations_STICS\/1\/3\/outputs-3-806_1893-638_NPP1-scenarioName.rds">
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238 <has_size value="0" negate="true" />
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239 </has_archive_member>
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240 <has_archive_member path="analyse_simulations_STICS\/1\/3\/report-3-806_1893-637_NPP1-scenarioName.csv">
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241 <has_n_lines n="133" />
23fc2d7fef97 "planemo upload for repository https://forgemia.inra.fr/redelac commit dad4c83e555d8c94c7bd3442c9b4771af97a0462"
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242 </has_archive_member>
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243 <has_archive_member path="analyse_simulations_STICS\/1\/3\/report-3-806_1893-638_NPP1-scenarioName.csv">
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244 <has_n_lines n="133" />
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245 </has_archive_member>
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246 </assert_contents>
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247 </output>
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248 </test>
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249 </tests>
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250 <help>
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251 *The usage of this tool is restricted to the user of the redelac_authorized group.*
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252
7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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253 *To be granted, apply to the REDELAC Project Team and then request to SIWAA*
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254
7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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255 Documentation
7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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256 -------------
7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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257 A tool to generate Stics Inputs according to a plan for REDELAC
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258
7f8f474a7bd7 "planemo upload for repository https://forgemia.inra.fr/redelac commit 29a2aee3b41d8da4d056600ea5cf4af978c714b9"
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259 Credits
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260 -------
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261 - Wrapped Tool Author: https://www6.paca.inrae.fr/stics_eng/About-us/Project-Stics-Team
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262 - Stics Site: https://www6.paca.inra.fr/stics_eng
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263 - Galaxy Tool Maintainer: Patrick Chabrier patrick.chabrier@inrae.fr
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264 - Copyright: INRAE
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265 </help>
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266 </tool>