Mercurial > repos > siwaa > stics4carsolel
annotate stics4carsolel.xml @ 2:5e581bfc5341 draft
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit c44e3ffa39b80279cb3226522f2b4f95f737e061"
author | siwaa |
---|---|
date | Fri, 28 Jan 2022 13:09:49 +0000 |
parents | f1070dc2446c |
children | 6a77442a3598 |
rev | line source |
---|---|
0
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
1 <tool id="Stics4CarSolEl" name="Stics4CarSolEl" version="1.0.0"> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
2 <description>Vle Stics simulations in rotation parallelized by cvle for the CarSolEl project</description> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
3 <requirements> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
4 <container type="singularity">docker://registry.forgemia.inra.fr/record/carsolel</container> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
5 </requirements> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
6 <command detect_errors="exit_code"> |
2
5e581bfc5341
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit c44e3ffa39b80279cb3226522f2b4f95f737e061"
siwaa
parents:
0
diff
changeset
|
7 bash $__tool_directory__/stics4carsolel.bash \${GALAXY_SLOTS:-2} ${cvle_plan} ${output_file} ${meteo_archive}; |
0
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
8 </command> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
9 <inputs> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
10 <param name="cvle_plan" type="data" format="csv" label="Select a cvle plan in (csv file)"/> |
2
5e581bfc5341
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit c44e3ffa39b80279cb3226522f2b4f95f737e061"
siwaa
parents:
0
diff
changeset
|
11 <param name="meteo_archive" type="data" format="zip" label="Select a meteo archive (zip file)"/> |
0
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
12 </inputs> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
13 <outputs> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
14 <data format='csv' name="output_file" label="Stics simulations results"/> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
15 </outputs> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
16 <tests> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
17 <test> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
18 <param name="cvle_plan" value="inputs/dummy50.csv" ftype="csv" /> |
2
5e581bfc5341
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit c44e3ffa39b80279cb3226522f2b4f95f737e061"
siwaa
parents:
0
diff
changeset
|
19 <param name="meteo_archive" value="inputs/meteo.zip" ftype="zip" /> |
0
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
20 <output name="output_file" ftype="csv"> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
21 <assert_contents> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
22 <has_n_lines n="151" /> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
23 </assert_contents> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
24 </output> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
25 </test> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
26 </tests> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
27 <help> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
28 the Stics4CarSolEl simulator |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
29 ============================ |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
30 |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
31 credits |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
32 ------- |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
33 |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
34 - Wrapper Maintainer: Patrick Chabrier patrick.chabrier@inrae.fr |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
35 - Tool Maintainer: Eric Casellas eric.casellas@inrae.fr |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
36 - Tool Site: https://forgemia.inra.fr/record/carsolel |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
37 - Copyright: INRAE |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
38 </help> |
f1070dc2446c
"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 79ec610c8fada89b587b48d008738ec75770d40a"
siwaa
parents:
diff
changeset
|
39 </tool> |