Mercurial > repos > siwaa > stics4carsolel

comparison stics4carsolel.bash @ 2:5e581bfc5341 draft

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"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit c44e3ffa39b80279cb3226522f2b4f95f737e061"
author siwaa
date Fri, 28 Jan 2022 13:09:49 +0000
parents bf2d7f74d5ba
children 6a77442a3598
comparison
equal deleted inserted replaced
1:bf2d7f74d5ba 2:5e581bfc5341
1 echo "Stics4CarSolEl Job starting:" 1 echo "Stics4CarSolEl Job starting:"
2 date; 2 date;
3 3
4 n_slots=${1}; 4 n_slots=${1};
5 csv_plan=${2}; 5 csv_plan=${2};
6 meteo_archive=${4};
6 sim_number=$(($(cat ${csv_plan} | wc -l) - 1)); 7 sim_number=$(($(cat ${csv_plan} | wc -l) - 1));
7 8
8 b_size=1 9 b_size=1
9 10
10 echo "number of GALAXY_SLOTS: ${1}" 11 echo "number of GALAXY_SLOTS: ${1}"
11 12
12 echo "expected simulations: ${sim_number}" 13 echo "expected simulations: ${sim_number}"
13 echo "cvle block size : ${b_size}" 14 echo "cvle block size : ${b_size}"
15
16 if [ "$OMPI_COMM_WORLD_RANK" == "0" ]; then
17
18 cp -r /data/vle-2001/pkgs/CarSolEl_data/data .
19 rm -rf data/meteo
20 cd data
21 unzip ${meteo_archive}
22 cd ..
23 fi
14 24
15 cvle -b $b_size -i ${2} -w work -P Stics4AgFlow -P CarSolEl_sim CarSolEl.vpz 25 cvle -b $b_size -i ${2} -w work -P Stics4AgFlow -P CarSolEl_sim CarSolEl.vpz
16 26
17 if [ "$OMPI_COMM_WORLD_RANK" == "0" ]; then 27 if [ "$OMPI_COMM_WORLD_RANK" == "0" ]; then
18 28