Mercurial > repos > siwaa > stics4carsolel

comparison stics4carsolel.bash @ 1:bf2d7f74d5ba draft

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"planemo upload for repository https://forgemia.inra.fr/record/carsolel/-/tree/master/tools commit 8e31109ca8b9104e8f66b9bf56c08cd0bfc1136f"
author siwaa
date Mon, 22 Nov 2021 15:15:08 +0000
parents f1070dc2446c
children 5e581bfc5341
comparison
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0:f1070dc2446c 1:bf2d7f74d5ba
12 echo "expected simulations: ${sim_number}" 12 echo "expected simulations: ${sim_number}"
13 echo "cvle block size : ${b_size}" 13 echo "cvle block size : ${b_size}"
14 14
15 cvle -b $b_size -i ${2} -w work -P Stics4AgFlow -P CarSolEl_sim CarSolEl.vpz 15 cvle -b $b_size -i ${2} -w work -P Stics4AgFlow -P CarSolEl_sim CarSolEl.vpz
16 16
17 ls work_*/*_byUsm.txt | xargs -t -i tail -n +2 {} | sort -n -k 1 -t ';' > resWithoutHeader.csv 17 if [ "$OMPI_COMM_WORLD_RANK" == "0" ]; then
18 18
19 head -1 work_0/1_byUsm.txt > header.cvs 19 ls work_*/*_byUsm.txt | \
20 xargs -t -i tail -n +2 {} | \
21 sort -n -k 1 -t ';' > resWithoutHeader.csv
20 22
21 cat header.cvs resWithoutHeader.csv > res.csv 23 head -1 work_0/1_byUsm.txt > header.cvs
22 24
23 mv res.csv ${3} 25 cat header.cvs resWithoutHeader.csv > res.csv
26
27 mv res.csv ${3}
28
29 fi
24 30
25 echo "Stics4AgGlob Job ending:" 31 echo "Stics4AgGlob Job ending:"
26 date; 32 date;