Mercurial > repos > siwaa > sunflo
diff tool_defaults_SUNFLO.xml @ 1:935e06766216 draft
"planemo upload for repository https://forgemia.inra.fr/record/RECORD/-/tree/3a14800d8c700f5acdf49d564adc9fe820aa1c25 commit 3a14800d8c700f5acdf49d564adc9fe820aa1c25-dirty"
author | siwaa |
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date | Thu, 25 Aug 2022 10:49:25 +0000 |
parents | |
children | a08cdfcedd4c |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_defaults_SUNFLO.xml Thu Aug 25 10:49:25 2022 +0000 @@ -0,0 +1,41 @@ +<tool id="SUNFLOdefaults" name="SUNFLO crop model default inputs and outputs" version="1.0.0"> + <description></description> + <requirements> + <container type="singularity">docker://registry.forgemia.inra.fr/record/record/azodyn_sunflo:ub2004_vle21</container> + </requirements> + <command detect_errors="aggressive"> + /bin/bash -c "Rscript --verbose /data/rDefaultAzodynSunflo.R sunflo_web.vpz sunflo"; + cp file_default_input.csv ${inputs}; + cp file_default_output.csv ${outputs}; + </command> + <inputs> + </inputs> + <outputs> + <data format="csv" name="inputs" label="Sunflo default inputs"/> + <data format="csv" name="outputs" label="Sunflo default outputs"/> + </outputs> + <tests> + <test> + <output name="inputs"> + <assert_contents> + <has_text text="simulation_engine.duration;simulation_engine.begin" /> + <has_text text="AUZ_2006.txt;Jour;sunflo" /> + </assert_contents> + </output> + <output name="outputs"> + <assert_contents> + <has_text text="id;path;integration" /> + <has_text text="INN;viewDbg/sunflo,sunflo_bio,contraintes:contrainte_azote.INN;all" /> + </assert_contents> + </output> + </test> + </tests> + + <help><![CDATA[ +Sunflo crop model default inputs and outputs provider + +Full documentation is available here : https://siwaa.toulouse.inrae.fr/ in section "Tool Tuto > Sunflo tool" +]]> + </help> +</tool> +