Mercurial > repos > siwaa > redelac_stics_e
diff redelacPlanExpander.xml @ 0:bc7ae8dd3d3c draft
"planemo upload for repository https://forgemia.inra.fr/redelac commit 841d6c6ada2dad3dd575d25aab620491fda5c611"
author | siwaa |
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date | Mon, 19 Jun 2023 15:51:01 +0000 |
parents | |
children | 789a70a4c317 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/redelacPlanExpander.xml Mon Jun 19 15:51:01 2023 +0000 @@ -0,0 +1,41 @@ +<tool id="redelacPlanExpander" name="redelacPlanExpander" version="1.0.0"> + <description>to expand REDELAC situations according to a plan</description> + <requirements> + <container type="singularity">docker://registry.forgemia.inra.fr/redelac/redelac-toolbox:latest</container> + </requirements> + <command detect_errors="aggressive"> + <![CDATA[ + python $__tool_directory__/redelacPlanExpander.py ${typeOfRotation} ${USMs} ${Liste_plantes} ${REDELACplan} ${mailles} ${USMsExp} ${SuccessionsExp} ${Stations} ${aclimParHorizon} ${latitudeMailleDrias} ${StationsExp} + ]]> + </command> + <inputs> + <param name="typeOfRotation" type="select" label="Select the type of rotation"> + <option value="PP">Prairie Permanente</option> + <option value="GC">Grande Culture</option> + </param> + <param name="REDELACplan" type="data" format="csv" label="Select a redelac spatial plan (csv)"/> + <param name="USMs" type="data" format="csv" label="Select a USMs list template (csv)"/> + <param name="Liste_plantes" type="data" format="csv" label="Select a Liste_plantes (csv)"/> + <param name="Stations" type="data" format="csv" label="Select a Stations (csv)"/> + <param name="mailles" type="data" format="csv" label="Select mailles files with link between DRIAS and Safran (csv)"/> + <param name="aclimParHorizon" type="data" format="csv" label="Select a aclimParHorizon (csv)"/> + <param name="latitudeMailleDrias" type="data" format="csv" label="Select a latitudeMailleDrias(csv)"/> + </inputs> + <outputs> + <data format="csv" name="USMsExp" label="Expanded list of USMs (csv)"/> + <data format="csv" name="StationsExp" label="Expanded list of meteo Stations (csv)"/> + <data format="csv" name="SuccessionsExp" label="Expanded list of successions (csv)"/> + </outputs> + <tests> + </tests> + <help> +Documentation +------------- +A tool to expand Stics situations according to a REDELAC spatial plan. + +Credits +------- +- Galaxy Tool Maintainer: Patrick Chabrier patrick.chabrier@inrae.fr +- Copyright: INRAE + </help> +</tool>